-
# AlphaFold2 리뷰
AlphaFold2 논문을 최대한 직관적으로, 자세히 리뷰합니다
[https://www.ai-bio.info/alphafold2-paper-review](https://www.ai-bio.info/alphafold2-paper-review)
-
I've tried using the standard alphafold2 setup via docker (converted to a singularity container) via the setup described at https://github.com/kalininalab/alphafold_non_docker, and both result in the …
-
The traceback is as follows:
```
> I1130 17:22:33.347284 140275321640768 run_docker.py:116] Mounting /home/a22/alphafold/project/6y4f -> /mnt/fasta_path_0
> I1130 17:22:33.365633 140275321640768 …
-
Hey,
Where can I find the embeddings produce by AlphaFold as you wrote in your paper?
I want given a protein (amino acid sequence) to be able to get its embedding vector.
Thank you,
Dan
-
https://github.com/Australian-Structural-Biology-Computing/proteinfold/blob/8ce05982ff57ba3722c4e87093307b68f9923d43/modules/local/run_alphafold2.nf#L67C23-L67C28
Should be truly random as each 5 m…
-
Good morning,
I would like to propose you to share another extremely useful example of AF2 usage. Many scientists are using protein embeddings for downstream tasks (i.e. function prediction). [AF2 …
-
**Describe the current behavior**
A clear and concise explanation of what is currently happening.
**Describe the expected behavior**
A clear and concise explanation of what you expected to ha…
-
### What happened?
receive an error while setting up alphafold
### gget version
0.3.7
### Operating System (OS)
Linux
### User interface
Command-line
### Are you using a computer with an Apple…
-
AttributeError: module 'collections' has no attribute 'Iterable' [at run Alphafold]
I got this error when I tried to use the Alphafold2 advanced in Google collab. Does anyone know how to fix it? Th…
-
When running the first cell/installing dependencies of the AlphaFold2_advanced.ipynb notebook within google colab, I am getting a numpy error (below). Any ideas on how to resolve this? Thank you!
…