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hi @d0ugal
I hava question about annovar, As we known, the gene structures of eukaryotes and prokaryotes are different. so How to use annovar to annotate the mutations identified in bacterial…
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Hi @gbouras13 ,
We analyzed some samples using the latest version, v0.10.1, but encountered an issue where `medaka` fails to detect the model version, defaulting instead to `r1041_e82_400bps_sup_v5…
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Hi!
What an amazing package.
I'm trying to display how the mean relative abundance of different bacterial genera develops over time. I filtered for IDs that have samples for all three time point…
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Thank you for making and maintaining dnaapler!
Streptomyces and other genera have linear chromosomes and often also linear plasmids.
Multiple genes on these replicons are located in a conserved…
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Make sure when a study unique id (the secret one) is created but the upload is not complete, to remove this study id.
So far, it is there but the next time you try to upload you get an error.
…
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[**Minomycin, a depended on antibiotic available at CureTypes**,](https://www.curetypes.com/what-is-minomycin/) is usually used to address various bacterial infections. It belongs to the tetracycline …
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Dear team,
Just wonder how I can use this tools for bacterial genomes since bacterial genomes are completely different, model should also be very different.
Thanks,
Jianshu
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Does the current version work to detect bacterial recipients?
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_N brasiliensis_
- 3rd replicate of 1st plate
- 1st replicate of 2nd plate with 3 concentrations
_A madur…
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Hello Team,
I simulated a shotgun metagenomic Nanopore dataset using NanoSim, containing:
65% bacterial sequences from 32 bacterial species
35% human sequences
For profiling, I created a Sylph…