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Hi @KaiHsiangHu,
Thank you for developing this great package!
I wanted to double-check a result that I have obtained with both real data and a fictional data example to understand the behaviour o…
ada59 updated
2 months ago
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Hey, Pascal
It is really a good packages. May I ask you if it is possible the beta-diversity (PBD, replacement, turnover, etc) between 2 epm object of the same grid. These two epm objects generated f…
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Make beta-diversity
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![bray](https://user-images.githubusercontent.com/102775904/170952236-ad90b980-657c-48f6-a7a3-9f9e05f028fc.png)
% 값을 찾아서 PC1 이런 식으로 나타내기
center 찍고 line 긋기?
군 두개씩 차이를 보여주는 방법??
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Is it possible to calculate pairwise Jaccard-type turnover indices? For example, for a 200 * 20 species-habitat dataset. I would like to know all the standardized coverage pairwise dissimilarity Jacca…
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Add an example showing how pairs of points can be connected on beta diversity map.
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Hello. I have succesfully ran contributional alpha diversity on my data. When I run the beta diversity script, the output generated files are empty. I ran the code using the default contributions outp…
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Hello,
Is there a phyloseq function/workaround to generate boxplots of say, unifrac distances, to show differences between groups ? something similar to the attached..
![image](https://user-ima…
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Would be nice to have beta diversity calculations with rarefaction, as described in [Pat Schloss recent preprint](https://www.biorxiv.org/content/10.1101/2023.06.23.546313v1).
Now, this can be achi…
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Dear Ben,
I am interested in comparing my metagenomes to a number of samples from the same biome that are publicly available. My comparison would be in the form of beta diversity estimates and the …