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This is split out from HBRC feedback #39 (@aceaves) to make it easier to address each in turn.
> All LINZ category codes need to be mapped to the new system as this is a foundation dataset. Some do…
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Please provide your opinion on the reproducibility of fusion genes detected when analyzed using Arriba. I conducted two types of analyses: 1. A case where the same template was used to create a librar…
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One thing that could be done to make this project even better would be to include a concordance as well.
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Ahoy!
I am quite excited to explore in more detail how strobealign behaves in b37 & hg38 across all of the GIAB samples ( at least for NOVA reads, others if budget allows ).
I have built the too…
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Hi There,
I'm trying to follow along this tutorial with my own data (http://iqtree.org/doc/recipes/concordance-vector)
I'm currently using the latest release (IQ-TREE multicore version 2.3.6 for…
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File "/home/corolth1/torchsurv/src/torchsurv/metrics/cindex.py", line 568, in _p_value_noether
raise ValueError(
ValueError: The standard error of concordance index must be a positive value.
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On the vocabulary page, we could have a section that shows mappings/concordances in our database for that vocabulary.
A few questions about this feature:
- Should all mappings be taken into accoun…
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The GATK SV clustering algorithm is here:
https://gatk.broadinstitute.org/hc/en-us/articles/4418051427867-SVCluster-BETA
Do we need their concordance code? Check with Alba.
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Hello
I have doubts that the normalization of the predictors is working with glmnet in the censored package. I have prepared 2 identical examples with different recipes, tuning the 2 parameters of an…
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As an editor I need to be able to create and publish a concordance of transcriptions