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Hello,
I am hoping to use QuPath interfacing through Python to split the channels of a multispectral image taken from a confocal microscope (e.g. an OIR image taken from a Confocal FV3000 microsco…
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I installed Raspbian-OpenFlexure system on my RPi 3, I installed required repo for ADC with pip.
Then I've downloaded [example extension folder](https://gitlab.com/openflexure/microscope-extensions/e…
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Radek (@chrapkiewicz) is looking at NWB for help sharing some upcoming optical data, and has some requests regarding device metadata. Here are the comments regarding 2p. (Radek, please correct and exp…
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Hello,
I am using readlif on .lif files from Confocal laser scanning fluorescence microscope (Leica Microsystems SP5).
Although I am getting most of the images as same as from LAS, only snapshot…
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Hello everyone,
And first thank you so much for developing such a useful package. I have been using it for the past few years and love it.
I just started to use it in 3D to analyze data from a …
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Hi, we are trying to use multi-fish pipeline to process EASI-FISH data obtained from an Olympus Confocal microscope.
Unfortunately, the data format is different so we cannot just load the raw data in…
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Is it possible for this tool to be used to reconstruct higher-resolution images from several 3D stacks acquired using fixed cells (i.e. normal confocal microscopy instead of MFM). Also would it be pos…
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First of all, congratz on new paper (SACD)! I tried it, and it works really well :)
Question: what is "effective NA" in the sparse-sim software? if I were to use confocal with 1.27NA water lens, f…
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It would be nice if npy2bdv would also offer the option to store data in a different datatype than int16. Maybe the writer could give a warning if data might have been altered? This is the case for an…
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Extension name (optional): 4DN-BINA OME Advanced + Confocal extension
Element name(s): NBOA:SpinningDisk
Field name(s):
- DiskPinholeDiameter
- DiskPinholeSpacing
- DiskBypass
- Homogeniz…