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Trying to authenticate Element X (iOS, Version 1.9.3) via QR code with our Matrix installation. Element Web displays the code, Element X scans it successfully and tries to set up the connection. After…
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Hello,
Thanks for the great package!
I am trying to extract the fragment count matrix to implement with the following notebook:
https://github.com/aertslab/pycisTopic/blob/old/notebooks/Toy_m…
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Can be reproduced on EX.
After login, the sdk will schedule:
- The upload the current device keys
- The first encryption sync
We can see from the logs that the initial `key/upload` is handl…
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@TomVuod please insert a check to make sure that count matrix is in dgCMatrix
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Trying to use BPCells to help with smoother analysis of Visium HD data but keep getting errors.
localdir visium_data
> # Convert to BPCells format
> expr_matrix expr_matrix_int
> write_ma…
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### Describe the issue:
So. I did count determinant of matrix np.array([[5,5,6],[7,7,5],[4,4,8]]), and it is 0. I also used web calculator and chat gpt to check. But as soon as python is running this…
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## Describe the bug
The current `feature_dataset_presence_matrix` only reports genes that have a total expression count > 0. Instead, it should report all genes that were listed in the original da…
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Hi,
I am trying to load a umi count matrix to build a seurat object but the problem is that in this count matrix which is seemingly is in a flat file format both the cell ids and gene ids are in ro…
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Hi,
CrsMatrixMultiplyOp should not store a local matrix device, just the rcp to the crs matrix and then in the apply calls should get the local matrix device. A consequence of storing the local matri…