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Hi,
I am trying to detect inter-chromosomal translocation events from targeted DNA-Seq data (PCR-based assay). Essentially I'd like to extract read pairs with R1 and R2 mapped to different chromoso…
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I'm trying to assess why a known fusion call was filtered in our data, I have tracked it down to this step:
`star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filte…
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## Bug report
_[Reported](https://nextflow.slack.com/archives/C02T98A23U7/p1730104468259449) in the nextflow-help Slack channel._
Processes that need to access data in several containers receive a…
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### 🐛 Describe the bug
When I run the repro script from https://github.com/pytorch/ao/issues/1297 with `TORCHINDUCTOR_LOOP_ORDERING_AFTER_FUSION=1`, I see an error. Here is a simplified repro:
Co…
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I am getting an error when I try to run the [Fusion/TMS2Independent example](https://github.com/thermofisherlsms/meth-modifications/tree/master/examples/Fusion/TMS2Independent). The full error with st…
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在运行train_fusion_head时会出现这样的错误，可以解答一下吗：
Traceback (most recent call last):
File "C:\Users\ZAQ\Desktop\Dif-…
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Hello,
I have a recent verkko 2.2 assembly with two chromosomal fusions (chr5-chr17, chr8-chr11). However, these translocations are not supported by the long reads or the hic data, from what I can …
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#### What data file(s) does this issue pertain to?
`fusion-annoFuse.tsv.gz`
#### What release are you using?
v13-v15
#### Put your question or report your issue here.
Per the comment …
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Originally found in `CombinedSchedulerTest.LayerNormBackward/dtype_double_batch_216_hidden_96` using
```
NVFUSER_DUMP=scheduler_params,cuda_to_file NVFUSER_ENABLE=kernel_debug PYTORCH_NO_CUDA_MEMORY_C…
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### Overview ###
This issue is a tracker for the next steps of enabling the data tiling fusion improvements, which are currently behind the `--iree-dispatch-creation-experimental-data-tiling` flag. O…