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Hi,
I wonder what you think about using t-SNE to visualize the tcrdist distance matrix. Can this be used to find clusters that are likely to recognize the same epitope.
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The error seems to be coming from the xmipp ImageHandler, `ih.scaleSplines(data=volume, ...)`.
Probably a version issue.
(flexutils-tensorflo…
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**Is your feature request related to a problem? Please describe.**
I would like to cluster/visualize retrieved vectors from the search or scroll APIs. This can be done by setting `with_vectors=True` …
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### Report
Working on the AIDA dataset, I get the following error when trying `TotalPseudobulk`:
```
Traceback (most recent call last):
File "/home/michaela.mueller/workspace/immune-v1-scripts…
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Hello. In the matrix service, some elements of certain requests are returning as null. Here is a sample response:
```
"sources_to_targets": [
[
{
"distance"…
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In the OptModelInputs object, the _pairwise_matrix requires significant computation time because it computes the distance matrix for the entire well data before then extracting the needed values for t…
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The documentation for `self_distance_array` has the following as the suggested way to reconstruct a full NxN distance matrix from the flattened upper triangular (-diagonal) N*(N-2) // 2 result.
`…
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Hey @gdalle, really cool stuff here!
I am quite interested in GridGraphs for the calculation of ecological connectivity. There is a cool distance metrics that has been introduced recently called th…