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lueckenlab
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patpy
BSD 3-Clause "New" or "Revised" License
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Tests
#76
farhadmd7
opened
1 week ago
0
[pre-commit.ci] pre-commit autoupdate
#75
pre-commit-ci[bot]
opened
3 weeks ago
0
Making repo public
#74
VladimirShitov
closed
1 month ago
1
Use CLR transform for composition baseline
#73
VladimirShitov
opened
1 month ago
0
Distance matrix is not always square
#72
mumichae
opened
1 month ago
1
Create a function for plotting histogram of distances
#71
VladimirShitov
opened
1 month ago
0
Worflow failing when no cell type key is provided
#70
mumichae
opened
1 month ago
5
Refactor interface
#69
farhadmd7
opened
1 month ago
6
Inconsistent interface
#68
VladimirShitov
opened
1 month ago
1
Feature/mofa2
#67
farhadmd7
closed
4 weeks ago
0
make symmetric works now on sparse mat too
#66
farhadmd7
closed
1 month ago
2
Fix PILOT import
#65
VladimirShitov
closed
1 month ago
0
Deal with cases where layer is .X
#64
mumichae
closed
1 month ago
1
Fix/update mrvi version
#63
farhadmd7
closed
1 month ago
1
Feature/diffusionemd
#62
VladimirShitov
closed
2 months ago
2
adds sum as aggregate, other dist metrics and refactors the method
#61
farhadmd7
closed
4 months ago
2
adds harmonypy and phate to dependencies
#60
farhadmd7
closed
5 months ago
4
Fix/51 GitHub actions failing
#59
farhadmd7
closed
6 months ago
1
Fix/49 python modules are decoupled from the docs
#58
farhadmd7
closed
6 months ago
2
Fix composition baseline
#57
VladimirShitov
closed
7 months ago
0
TODO for the paper
#56
VladimirShitov
opened
7 months ago
0
Fix/54 wrong dim anndata + wrong scpoli params
#55
farhadmd7
closed
6 months ago
3
wrong dimension of anndata obj + wrong scpoli params
#54
farhadmd7
closed
6 months ago
0
Feature/impl donors subset in evaluate rep
#53
farhadmd7
closed
6 months ago
2
adds missing dependencies, fixes installing PILOT
#52
farhadmd7
closed
7 months ago
2
Github actions failing
#51
farhadmd7
closed
6 months ago
0
Missing dependencies in pyproject.toml
#50
farhadmd7
closed
1 month ago
0
Python modules are decoupled from the docs
#49
farhadmd7
closed
6 months ago
0
Wrong donors order in composition baseline
#48
VladimirShitov
closed
7 months ago
0
Rename "average" to "agregation" in Pseudobulk methods
#47
VladimirShitov
closed
4 months ago
1
Fix installation
#46
VladimirShitov
closed
1 year ago
0
Too strict filtering of cell types in pp.filter_small_cell_types
#45
VladimirShitov
opened
1 year ago
0
Add example notebook
#44
VladimirShitov
closed
1 year ago
1
Fix nan distances
#43
VladimirShitov
closed
1 year ago
0
Small fixes
#42
VladimirShitov
closed
1 year ago
0
Improve logging
#41
VladimirShitov
opened
1 year ago
0
Small fixes
#40
VladimirShitov
closed
1 year ago
0
Mrvi bug fix
#39
VladimirShitov
closed
1 year ago
0
Optimize mrvi
#38
VladimirShitov
closed
1 year ago
0
Fixing stuffs
#37
VladimirShitov
closed
1 year ago
0
MrVI calculation takes a lot of time for big datasets
#36
VladimirShitov
closed
1 year ago
1
Speeding up phemd
#35
VladimirShitov
closed
1 year ago
0
Add pyphemd
#34
VladimirShitov
closed
1 year ago
0
Upload script for GloScope
#33
VladimirShitov
closed
1 year ago
0
Refactoring pilot
#32
VladimirShitov
closed
1 year ago
0
Evaluation of representations
#31
VladimirShitov
closed
1 year ago
1
Fix celltype pseudobulk bug
#30
VladimirShitov
closed
1 year ago
0
Downstream analysis
#29
VladimirShitov
closed
1 year ago
0
Downstream analysis
#28
VladimirShitov
closed
1 year ago
0
Fix metadata bugs
#27
VladimirShitov
closed
1 year ago
0
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