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Currently, the guide promotes using `sampleSizeValue` and `sampleSizeUnit` to report read count information at the sample level. However, this conflicts with the recommended use of those fields to cap…
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When `
--config dna_r10.4.1_e8.2_400bps_5khz_modbases_5mc_sup_prom.cfg` is given as the model, this doesn't say what the model version is for matching with clair3 variant calling models.
To fix th…
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## Tissue (DNA) database of BHHU-ATRA
Dataset link: https://www.bhhuatra.com/en/tissue-dna-database
Region: Bosnia and Herzegovina
Taxon: amphibians and reptiles
Type: undefined
Why is this impor…
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https://github.com/gbif/course-dna-barcoding/blob/53bc15f7bfc17e04e6d2cd9625f41b14a3e3fb18/keydocs.en.adoc?plain=1#L113
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For the mosquito sample classes, the harvester is failing to record data from the API, even though the information is available.
For Bulk Identified/DNA Extracts/Pathogen Extracts/Pinned Vouchers:
…
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Hi Alan,
I've returned with another question. I know that you say that Nanodisco requires ONT sequenced WGA DNA for the methylation-free dataset. However, would data generated from the Rapid PCR Ba…
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**New term details**
```
Term name - Denoising approach
Structured comment name - denoising_appr
Definition - Tool and parameters used to denoise sequence reads.
Expected value - algorithm name, …
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https://docs.gbif.org/course-dna-barcoding/en/data-journey-bumblebee-pollinators.html#task-6
link: https://v3.boldsystems.org
change to: http://www.boldsystems.org/
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From @laurabrenskelle: https://github.com/ioos/bio_data_guide/issues/265
> The [DNA-derived Data Extension page](https://ioos.github.io/bio_mobilization_workshop/edna-extension/) details how to use…
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Came to my mind that pre-course letter should be added as a part of the course doc, somewhere after [https://docs.gbif-uat.org/course-dna-barcoding/en/course-description.html#intended-learning-outcome…