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Psy-Fer
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buttery-eel
The buttery eel - a slow5 guppy/dorado basecaller wrapper
MIT License
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samples per second output
#58
Psy-Fer
opened
3 days ago
2
guppy error:CommandLineProcessor::create_configuration:Missing required parameter basecalling.model_file
#57
hanyishui0612
closed
3 days ago
24
Cannot basecall squigulator reads
#56
maximilianmordig
closed
4 days ago
3
Some difference in the thread model from v0.4.2->0.5.1?
#55
hasindu2008
opened
1 week ago
5
Readme fix
#54
hasindu2008
opened
1 week ago
0
RNA m6a called reads seem not to align?
#53
hasindu2008
opened
1 week ago
0
Model convention and availability of the aligner in buttery-eel
#52
hasindu2008
opened
2 weeks ago
19
Doesn't exit when ran out of memory
#51
imsuneth
opened
4 weeks ago
2
Error with exit code
#50
hasindu2008
opened
4 weeks ago
0
add dot try on barcode summary
#49
Psy-Fer
closed
1 month ago
0
Error: "An exception occurred in stage 3: KeyError - 'barcode_full_arrangement'"
#48
Timothy-Amos
closed
1 month ago
2
7.4.12 dorado for v0.5.0 buttery-eel
#47
Psy-Fer
closed
1 month ago
0
Connection error. [timed_out] Failed to establish connection with address
#46
edeuse
closed
1 month ago
5
Add extra sam tags
#45
Psy-Fer
closed
1 month ago
0
add barcoding info to the sequencing summary when turned on
#44
Psy-Fer
closed
1 month ago
1
Detect the basecall model automatically
#43
hasindu2008
opened
2 months ago
1
Duplex calling using fake 10 read hack
#42
Psy-Fer
closed
1 month ago
0
Add model version to output
#41
Psy-Fer
closed
1 month ago
4
move_and_trace_enabled has changed to move_enabled in ont-pybasecall-client-lib 7.4.12
#40
michaelodear
closed
1 month ago
2
Lib change and prep for duplex
#39
Psy-Fer
closed
3 months ago
0
New numpy causes installation to fail: numpy.dtype size changed, may indicate binary incompatibility.
#38
tjprins
closed
3 months ago
2
Connection error - file name too long
#37
denisbeslic
closed
5 months ago
4
Error when running buttery-eel on macOS
#36
kisarur
closed
1 month ago
9
split_qscore.py ignoring reads
#35
VandaLovejoy
closed
7 months ago
2
add a --resume option
#34
Psy-Fer
opened
7 months ago
0
KeyError - 'alignment_sam_record'
#33
imsuneth
closed
7 months ago
1
Key error - 'mean_qscore'
#32
denisbeslic
closed
1 month ago
12
Gets all reads key error with dorado
#31
kir1to455
closed
1 month ago
11
Missing usage option(s)!
#30
OZTaekOppa
opened
9 months ago
4
Can Guppy ont-pyguppy-client-lib version compatible with Doradoont-pyguppy-client-lib version？
#29
kir1to455
closed
8 months ago
1
Enhancement: Add Final total number of reads basecalled at end
#28
Psy-Fer
closed
2 months ago
1
Fix for old guppy API and mod calling newline bug
#27
Psy-Fer
closed
11 months ago
0
"Unexpected option '--use_tcp' found on command line." (Guppy 5.0.11)
#26
hengjwj
closed
11 months ago
12
update dev from main
#25
Psy-Fer
closed
11 months ago
0
cut off params update
#24
hasindu2008
closed
1 year ago
1
Fix dorado calls
#23
Psy-Fer
closed
1 year ago
0
pulling main to dev for fixing dorado
#22
Psy-Fer
closed
1 year ago
0
Gets many reads skipped with dorado
#21
uaudith
closed
2 months ago
1
Dev
#20
Psy-Fer
closed
1 year ago
0
Multiproc
#19
Psy-Fer
closed
1 year ago
0
dev
#18
Psy-Fer
closed
1 year ago
0
update dev from singleproc main
#17
Psy-Fer
closed
1 year ago
0
Buttery-eel using a different guppy config file than requested
#16
Timothy-Amos
closed
2 months ago
1
Add some read-id list for selective basecalling
#15
Psy-Fer
closed
2 months ago
2
demultiplexing remora SAMs
#14
hasindu2008
closed
2 months ago
3
Add version checks for guppy and lib
#13
Psy-Fer
closed
1 month ago
2
Update to v0.2.2
#12
Psy-Fer
closed
1 year ago
0
Multiple input blow5 files (blow5 dir as input)
#11
hiruna72
closed
1 year ago
2
Some weird warning in the multi-proc branch
#10
hasindu2008
closed
11 months ago
6
Extra SAM tags
#9
hiruna72
closed
1 year ago
1
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