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**Is your feature request related to a problem? Please describe.**
Implement an age clock measurement method for DNA methylation arrays
**Describe the solution you'd like**
Implement preprocessin…
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Hi,
I have GWAS summary data and individual level data in the same cohort, also have DNA methylation prediction models. I use GWAS summary data to run Predict.py, get the methylation-level associati…
ymqwa updated
2 years ago
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I am using below command, but output contains non-CpG methylation predictions? Could you please confirm and provide solutions to remove non-CpG sites predictions?
Command used:
```
dorado basecal…
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### To Do List:
- [x] filter the fam file for only eur based on the file of `EUGEI_GROUP_EuroOnly_PCs_NonRefPanel_Dec17.txt`
- [ ] only 794 left
- [ ] the third column of the bim file (Position i…
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Initial group info you provided:
-----------------
| Name | Department/Program | Expertise/Interests |GitHub ID |
| ------------- | ------------- | ------------- | ------------- |
| Samantha Sch…
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Hi,
I am trying to run reptile on pre-trained model mm_model_coreMarks.reptile using methylation data. Is there any issue with bw generation, I have methylation base call bed files containing chr no,…
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1. A request:
Is there any way that the error. files could be e-mailed to us
2: http://snapshot.geneontology.org/reports/gorule-report.html
I this file there are a bunch or rows about pre…
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http://doi.org/10.1101/069096 (also http://biorxiv.org/content/early/2016/08/11/069096 because the DOI isn't working for me)
**At a glance:** Uses a pretrained DeepSEA model (#13) to filter and group…
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- [x] sld3 = treslin TICRR jackhammr iteration 7 (submitted to InterPRO)
- [x] Update species distribution
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Hi!
I am a PhD student and have been using the compartments function in minfi (and as reported in your 2015 [paper](https://genomebiology.biomedcentral.com/articles/10.1186/s13059-015-0741-y)) and …