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HPO has the rather general term '[adverse drug response](https://hpo.jax.org/app/browse/term/HP:0020172)', which is probably not particularly useful as a query in Translator. I just [did that search](…
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### Report
FAILED tests/metadata/test_drug.py::test_drug_dgidb - KeyError: 'drug_claim_name'
### Version information
_No response_
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If the ClinVar significance contains a term `Pathogenic,drug_response`, does gene.iobio remove the non-significance terms (drug_response in this case) so that the displayed term is just `Pathogenic`? …
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When plotting a cuminc() plot and adding a risk table, the order of the strata in the risk table is alphabetical. Is it possible for the order to follow the levels of a factor?
In the example below…
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@vemonet
running /predict-drug-target at https://predict-drug-target.137.120.31.160.nip.io/docs#/
with
{
"subjects": ["PUBCHEM.COMPOUND:5329102"]
}
yields an Internal Server Error
…
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**Describe the bug**
Dictionaries in the ot-ui-apps need to be updated to accommodate new clinical data sources available in 23.06
**Observed behaviour**
The indication widget in DEV currently cr…
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New term request Abuse of sympathomimetic drugs (nadea3_211012200817): Cocaine, ecstasy, uppers UMLS: 0154536
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https://arxiv.org/abs/1706.08203
Looks interesting. We should add an implementation to DeepChem
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We need to map the following terms the NCI thesaurus or the appropriate ontology, or create new ones as needed:
decreased sensitivity
detrimental effect
increased benefit
no response
no sensitivity
r…
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https://arxiv.org/abs/1706.08203
> We present two deep generative models based on Variational Autoencoders to improve the accuracy of drug response prediction. Our models, Perturbation Variational …