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**Describe the bug**
Dear bamtocov team,
I have human WES data and am trying to run bamtocov. After 6 hours, not even half is done/calculated, even when using 24 threads. Maybe I am missing somet…
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Issue destinado a recopilar aquellas fuentes bibliográficas, así como datos de secuenciación y herramientas de tratamiento y análisis de los mismos, que podrían resultar útiles e interesantes a la hor…
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### Is there an existing module for this?
- [X] I have searched for the existing module
### Is there an open PR for this?
- [X] I have searched for existing PRs
### Is there an open issue for this…
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“SV calls can be inferred from discordantly aligned reads from whole genome sequencing (WGS) using different algorithms” in the introduction section, I am confused that whether CNV &SV calls from whol…
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@mandichen
Hi,mandichen
Good job and I am very interested in your research, but I have some questions.I used the sample data BM2_v0s0_n_200.h5ad and Macosko_cell_cycle_genes.txt to get the follow…
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### Description of the bug
Hi Developers,
I'm trying to run the Sarek implemented ASCAT for CNV analysis on WES data. On the nfcore Sarek website, it's suggested to follow 5 steps, as specified in…
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Hello @Beifang -
I am an avid fan of MSIsensor and routinely use it in the calling of MSI status from exome sequencing data. Recently we have started to switch our analysis to RNAseq data and I wa…
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thank you so much for this great work!!!
could you please provide more train datasets about ovarian cancer ?
i am so pleased that you would reply to this messages
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so pleased to use this,but i wonder whether this vae could be used on cpu not gpu?hope for your request
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I was trying copyVAE on two different datasets to get an idea for its performance and noticed a few small things that I wanted to point out, as potential improvement suggestions or in case someone els…