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Hi all,
I am using align_trim.py script to remove primers from the alignment. In me case, we have performed SARS2 amplification with v3 primer set, and then sequenced with illumina (Miseq).
I …
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Hi all,
Thought I would open up an issue to discuss the container-in-a-container issues that we in UKCEH (@CansuUluseker and @mjhollaway) are having.
Our goal is to use eWaterCycle within a [Dat…
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Hello RSM-Team,
During the implementation of my model, which I am doing for my bachelor thesis, a few questions appeared to me.
To my model: it has 14 Subbasins, is a runoff model with HBV and G…
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Hi Sara,
I've been trying to build custom databases by following FastViFi Readme. Building databases for HCV and EBV were successful, however, building the hbv databases for k=18, k-22 were unsucce…
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### Describe the bug
az vm list-sizes shows available cores for HB but for HBv[2--4] it shows the full number of cores of the SKU.
It seems it would make sense to have the same output for all HBs …
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Due to the May Schedule, this was to be done at home. I think it would be better to start in class With exercise 1 and get students to do exercise 3 at home (but with the model from exercise 1, only u…
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All needs to check out with the fasta representation.
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Currently camels USA files are supported by HBV forcing.
This functionality should become part of eWaterCycle in future and was mostly done for the purpose of my thesis.
Some streamflow files incl…
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**Summary !!!**
- **BioModel Name**: Shao2022 - S2DV: converting SMILES to a drug vector for predicting the activity of anti-HBV small molecules
- **BioModel Tag**: Machine learning model, Ersil…
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I tried to run the pipeline with a dataset, but had several problems.
Firts I ran the pipeline without adjusting the config, except for the sample annotation file. After that I tried to set `doPer…