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I've installed the latest FAST-iCLIP and I'm still having a lot of problems. I'm just trying to run the example command on the example data:
```
$ fasticlip -i rawdata/example_MMhur_R1.fastq rawd…
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Hi everyone,
I am curious to use your tool on our in-house iCLIP data set.
After a very convenient installation (conda installation, peakhood v0.3), I executed the 'peakhood extract' and ran i…
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Recently bacterial labs have started to perform iCLIP and our lab is planning to perform experiments on some bacterial strains. It will be a big enhance to support all of this community with a tool av…
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While we’re on the topic of faux font styles, it seems that our faux bold is wrong too. However, all I know so far is that the popular “Fansub Block” font (which has a single glyph that is a rectangle…
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The `\movevc` when used for `\clip` tags, moves the clip throughout the text/shape. Also, when it is used for `\iclip` tags in y direction it moves the whole text/shape alongside the clip; however, in…
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Hello all,
I tried to run the example but it was failed (problem is attached).
Would you please advise me on how to proceed ?
Amir
```
amir@amir-VirtualBox:~/FAST-iCLIP$ fasticlip -i '/home/…
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Currently annotation calling is one of the largest bottlenecks of the pipeline. It is currently split into several rules and accompanying scripts.
Rules
- peak_Transcripts
- peak_ExonIntron
- pe…
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I am interested in running Clipper on some iCLIP data and I get this message repeatedly when I run the most recent build:
ERROR:root:transcript timed out local variable 'expanded_Nreads' referenced b…
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Hi Zhang Lab team,
Firstly, I'd like to commend you on the excellent single-end CLIP data analysis tutorial available on your site; it's been incredibly useful.
https://zhanglab.c2b2.columbia.edu/…