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I was thinking about adding [Integrative pathway enrichment analysis of multivariate omics data](https://doi.org/10.1038/s41467-019-13983-9) by Paczkowska et al from the recent PCAWG release.
> 202…
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**Operation name:** < multiomics data integration >
**Short description:** < Integrate or combine multiple omics data of same or different type >
**Parent URI(s):** < http://edamontology.org/to…
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Using the tutorial on https://bioc.ism.ac.jp/packages/3.7/bioc/vignettes/enrichplot/inst/doc/enrichplot.html , I am able to generate object ego and generate a figure from goplot
I then convert my g…
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We plan to expand our catalogs of tutorials for whole-genome microbiome data analysis.
Here are some ideas we will implement:
- Expand the introduction slide deck to add more overview of the diffe…
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Hi,
First time using your package.
I'm wondering if you have a manual for running conditional analysis. Thanks
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Hi Guangchuang,
I found `enrichKEGG` returned different results in different R sessions. It's strange, and I don't know why.
Test 1, no enrichment was found:
```R
> head(DE_genes2)
…
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This issue contains monthly updates to the ranked list of PubMed papers for curation. The full list can be found [here](https://github.com/tanayshah2/bioregistry/blob/5560dcf284f2c0309287e0a5a551e435e…
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### Please describe your wishes and possible alternatives to achieve the desired result.
Continuing the discussion from #1481, we are considering [`Pint`](https://pint.readthedocs.io/en/stable/index…
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The plot is created, but I have no idea on the error.
I have a DEG set produced by DeSeq2.
I get the sorted ranked with ENSEMBL names (hg38) as:
```
head(geneListDF)
ENSG00000256377 ENSG000001597…