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Hi!
I want to apply ctranslate2 to [KNN-MT](https://arxiv.org/abs/2010.00710) (There are some pytorch implementations, [knn-box](https://github.com/NJUNLP/knn-box),
and [sockeye](https://github.co…
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```
#run code
import omicverse as ov
import scanpy as sc
import matplotlib.pyplot as plt
ov.utils.ov_plot_set()
adata = ov.read('VIA-test-P.h5ad')
adata
```
```
AnnData object with n_obs × n…
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Thanks for your nice work! I am trying to reproduce results of multi-domain datasets.
However, the results i get are quite different from the reported results in the paper.
When I followed your guid…
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# 🌟 Adding the kNN-LM and kNN-MT models
## Model description
The kNN [Language Model](https://arxiv.org/pdf/1911.00172.pdf) and [Machine Translation](https://arxiv.org/pdf/2010.00710.pdf) levera…
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Hello!
I am trying to use the VFC to obtain clusters. I tried to adapt from the Jupyter notebook but I think I am missing something as I am getting an error.
My code:
```
G = gt.Graph(mir128_2…
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I've tried transformed cuml's code to `mars.lean` in same api like bellow:
```python
from mars.learn.neighbors import NearestNeighbors
def calculate_knn(emb: md.DataFrame, topk: int, device='cpu') …
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Hi, I recently tried to run the EB differentiation PHATE tutorial. The tutorial is run in python, but I am more used to R, so I tried to run using RunPHATE() function implemented in seurat ( https://g…
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```
import scanpy as sc
import anndata
import time
import os,wget
import cudf
import cupy as cp
from cuml.decomposition import PCA
from cuml.manifold import TSNE
from cuml.cluster import KMea…
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I am attempting to get the classifier working with the following:
`python ../pyAudioAnalysis/pyAudioAnalysis/audioAnalysis.py classifyFolder -i samples/ --model knn --classifier
knnBarkDetect`
bui…
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Error in SCTransform: Warning message: In size + sum(size_args, na.rm = FALSE) : NAs produced by integer overflow ( Similar to Issue #9316)
Preface: I'm a bit new to Seurat, so apologies if this i…