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### Is there an existing module for this?
- [X] I have searched for the existing module
### Is there an open PR for this?
- [X] I have searched for existing PRs
### Is there an open issue for this…
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Hello,
I polished my assembly using arrow and I have a .gff file, but no .vcf.
Is it possible to run Merfin using a .gff file ?
Otherwise do you know a way to cenvert .ggf to .vcf ?
Thanks
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Hi，
I got an error when running merfin (-polish) :
terminate called after throwing an instance of 'std::bad_alloc'
what(): std::bad_alloc
Failed with 'Aborted'; backtrace (libbacktrace):
…
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In the last few months we have swapped the file paths used in tests from:
```nextflow
file(params.test_data['sarscov2']['genome']['genome_fasta'], checkIfExists: true)
```
to direct paths like:
`…
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Hi,
I assemble a genome using Hifi reads. However, I am confused that NGS reads and Hifi reads which might be better for qualifying our genome. I thinks NGS reads will be biased on high GC and repet…
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[//]: # (REMBEMBER! Add links to things related to the bug using for example:)
[//]: # (https://www.wowhead.com/wotlk)
**Description:**
When i'm saving a set i can only name it with numbers, ho…
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### Have you checked the docs?
- [X] [nf-core website: troubleshooting](https://nf-co.re/usage/troubleshooting)
- [X] [nf-core modules documentation](https://nf-co.re/docs/contributing/modules)
### …
-
### Is there an existing module for this?
- [X] I have searched for the existing module
### Is there an open PR for this?
- [X] I have searched for existing PRs
### Is there an open issue for this…
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Hello, I'm sorry for the inconvenience, but is there a tutorial somewhere on how to polish a Canu assembly of Nanopore reads using Illumina reads? The Canu github linked me to here: https://github.com…
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Hi!
FYI, I'm running `merfin -dump -threads 8` at the moment, and it is currently running the `meryl count` step on the genome sequence fasta with 16 threads. Is this a bug?
Best,
Jessen