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When running merqury, the maternal then paternal haplotypes are supplied as command line arguments. Does merqury use the positions of these args for anything, or would it produce the same results if h…
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Hi @arangrhie,
Are you considering to release a new version of Merqury?
I saw that you committed Merqury to solve some issues and to use Meryl 1.4, however the last release is Merqury 1.3 from 20…
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Greetings!
I kindly request your guidance in addressing this error. Your assistance is greatly appreciated.
Additionally, I believe it would be highly beneficial if your team could enhance the do…
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![1716898870793](https://github.com/marbl/merqury/assets/92558135/6994b2ea-8576-4402-8502-fd83774f72d6)
Hi,
What should the completeness in the picture be?
Furthermore, what is the meaning of "…
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Both [Inspector](https://genomebiology.biomedcentral.com/articles/10.1186/s13059-021-02527-4) and [Merqury](https://genomebiology.biomedcentral.com/articles/10.1186/s13059-020-02134-9) produce QV valu…
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Hello,
I'm having some issues getting any output from Merqury.
I'm working with Illumina data.
I built the meryl database with the following code (in a nextflow workflow)
meryl k=21 …
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Hi,
I'd like to evaluate my assembly. I have several Illumina fastq files. For each library I have one fastq file for Forward and one for Reverse reads.
What is the best way to use Meryl in the g…
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Tool_id toolshed.g2.bx.psu.edu/repos/iuc/merqury/merqury/1.3+galaxy2
MTS https://toolshed.g2.bx.psu.edu/repository?repository_id=5a89a0b3ecd57228
Install at ORG
EU and AU currently host it.
http…
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Hey,
Great tool, it's very useful and easy to use!
I ran Merqury on an Illumina-based assembly I had and obtained a completeness estimate much larger than I expected, given the genome's known siz…
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Hi, I assembled the genome of allotetraploid species using hifiasm with size of ~3.7gb. I used the PacBio HiFi reads in Merqury for kmer analysis of genome estimation of our allotetraploid species. I …