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In this issue, I detail the investigation into the impact of relapse in survival rates. This was done in the code `model_training/primitive_vs_metastasis_model.py` with the following command:
```c…
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High-Fat Diet Enhances the Liver Metastasis Potential of Colorectal Cancer through Microbiota Dysbiosis
https://www.mdpi.com/2072-6694/14/11/2573
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In the file `data_preprocessing/6_survival_primitive_vs_metastasis.py` we perform the following log-rank test.
- Null Hypothesis (H₀): There is no difference in survival distributions between the …
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which column in the clinical_data should i consider to know if the tumor has recurred or not?
does _RFS_IND=1 mean definitely recurred?
how do i know if the tumor is primary or second primary?…
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Dear,
This is my first try with WSInfer, and I would like to ask for more features and advice on it.
The aim of the project:
(1) to identify metastasis sets, the statistics include: the numbe…
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We have tried running QA(non-large), document classification and the 3 RE models. All of them seem to have learned1, learned2,.... learned9 in the output.
What do they stand for or is there any step …
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Hello~
We have a scRNAseq result of primary tumor and matched metastasis sample.
Under the assumption that metastasis sample has a higher value of pseudotime and primary sample is root state, w…
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Thanks again for your work. I repeated Tasks 1->3 on mistral-7B and vicuna-7B and got very similar results for all tasks, however I noticed something strange when looking through the results JSONs for…
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Hello,
Thank you for the amazing tool. It works really good. I have 2 particular questions.
I have 2 big datasets, primary lung adenocarcinoma tumor and brain metastasis of lung adenocarcinoma.
Th…
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Confusingly, I found two separate file formats in the Onc WG drive for the requested submission file format of concept_relationship_stage so I have provided the same mappings in both formats. (Could y…