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Hi,
I am attempting to utilize DeepPolisher for polishing my initial genome assembly. Is it applicable to other eukaryotic organisms, or is it necessary to retrain the model?
Best,
ZMZ
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Hi,
Love the package, great work!
It would be nice to enable expansion of the model to organisms not on the list. Or maybe this can be done via the fine-tuning script? Thanks!
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Hi,
Can non-model organisms use this tool to infer networks?
Thanks a lot for your time and effort!
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Hi, I still need to go through the details. I just installed and started the Test run. We have sequenced and assembled some ciliate genomes that have never been reported. I am a newbie in the field of…
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The list of model organisms that researchers are using for studies of development is the following:
- Human - Homo sapiens
- Mouse - Mus Musculus
- Zebrafish - Danio rerio
- Chick embryo - Gallu…
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I have been trying to use clipper with a custom annotation (hg38 plus additional over expressed genes) but I am unable to get it to work. In the wiki it mentions that when not using a model organism y…
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Hello developers,
Very cool tool and great paper.
I was wondering if this tool could be adapted for non-human samples (e.x. cattle)? Or was it specifically developed or trained with hg19 in mi…
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Please let us know how you feel about our [approach](https://github.com/circadianmentalhealth/circadian-data-standards#readme)
to provide multiple organism or even technique specific templates.
Yo…
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**Describe the bug**
400 Bad Request - Faraday Error
**To Reproduce**
Steps to reproduce the behavior:
Running my function in a rails app.
Function takes a string argument OCR-text, which…
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The Alliance of Genome Resources curators have developed a set of terms from describing the various generation methods used to create new mutant alleles in model organisms. We have a spreadsheet that …