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I have been running MSDIAL based FBMN analysis. My data is from Thermo Orbitrap. I always get this error:
Columns (0,1,2,6,7,8,9,10,11,12,13,14,15,16,17,18,22,23,24) have mixed types. Specify dtype…
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_de novo_
Do your own molecular clock? MEGA alignment; IQtree / BEAST; crude calibration?
ms609 updated
7 months ago
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Related to #393. The idea is to extract _selectors_ from the alignment data structures in BioJava (**AFPChain** and **MultipleAlignment**) so that any molecular viewer can represent structure alignmen…
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Hi,
Apologies for opening yet another issue, but I've encountered a small error with pcgr. I believe this is related to our test dataset, which is limited to chromosome 19, and the way that R read…
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I am trying to align 831 alphafold-predicted PDBs and the program stops running with the following error:
Failed to execute tmp/10218790963214741954/easystructuresearch.sh with error 13.
The jo…
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From some quick testing I found that this error occurred only when the K80 model was selected *and* the "ML Freq" box was checked.
Autogenerated report:
```json
{
"name": "Error",
"message"…
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I am curious about what the maintainers here think of the new [Apollo Federation](https://www.apollographql.com/docs/apollo-server/federation/introduction/) API and how that simplifies what this proje…
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Tasks so far.
Start with R-HSA-163765 "ChREBP activates metabolic gene expression"
- [x] check charge and mass balance for alignment with RHEA
- [x] edit molecular events to make them GO-CAM compli…
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Hi, I'm a developer on the [METASPACE](https://metaspace2020.eu) project.
I'm investigating methods for imzML file recalibration in conjunction with molecular databases (HMDB, lists of theoretical…
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Dear Wayne,
Every now and then I'm looking for freely available molecular biology software, e.g. to give it to our beginner students or use it by myself.
For my own little problems I'm actually u…