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Hi,
I use the following code to create precomputed files from a list of `.tif` images:
```python
import os
import numpy as np
import tifffile
import imageio.v3 as iio
from PIL import Image
I…
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您好，我在运行LeViT-UNet模型时遇到了一下错误：
Traceback (most recent call last):
File "D:/Program Files/JetBrains/PyCharm Community Edition 2023.1.4/plugins/python-ce/helpers/pydev/pydevd.py", line 1496, in _exec
…
degts updated
6 months ago
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Thank you very much for this repository.
If there are some failed segmentation, is it possible to adjust it manually? as you can see in this example the psoas muscles are not fully segmented at the…
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Dear fk128:
Very appreciate to great tool and codes. Beautiful muscle segmentation. Thank you.
Can I use segmentation only (by skipping L3 detection ) ? One slice input would be better.
My data i…
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Hi, based on description, "Unzip inside the folder DNN_muscle_segmentation the files 'leg.zip', 'thigh.zip' and 'thigh_leg.zip' (containing the weights of the DNNs) provided in the release."
Where I …
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It seems that adding, and then removing views does not properly release memory
e.g. If I open the platynereis dataset, I start at a memory usage of about 38%. If I then view the bookmark 'Figure 2C…
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Hello! I tested the model on some of my images, but for some reason it doesn't segment the muscles completely. Is there some specific preprocessing I need to do before the segmentation? Thank you!
…
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Hi pipeline creator,
I am new to IMC data analysis so please bear my ignorance. My query related to this- https://bodenmillergroup.github.io/ImcSegmentationPipeline/ilastik.html
While trying to im…
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It would be really helpful for us to now who is using TotalSegmentator and what they are using it for. Therefore, we invite you to comment on this issue: What are you using TotalSegmentator for? What …
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## Description
The objective would be to generate susceptibility maps of the spine and the brain using segmentations generated for the dataset `whole-spine`.
## Current state
Currently, segme…