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Hello author, thank you for your contribution. I encountered some issues while using this code. During the first round of validation, I found that the validation speed was very slow, taking almost fiv…
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作者你好!感谢你的出色工作!能否提供一份可以打开gt.nii.gz、img.nii.gz和pred.nii.gz文件的代码,并像您一样进行颜色区别;同时我需要一份预处理后的ACDC数据集,十分感谢!邮箱是:1769838453@qq.com
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### Description
When generating the QC report for rootlets with a T2w image of `0.4x0.4x0.8 mm`, the spinal cord is squeezed in the R-L direction:
![Capture d’écran, le 2024-11-26 à 14 00 30](h…
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I cannot calculate the MPM parameters because it is a problem with the vertical concatenation of the my MPM contrast files.
Specifically, this is my input of my MPM contrast files:
```
inputs{6,c…
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**Description**
Continuous errors with 'FileNotFoundError: No such file or no access: '/XXX/data/AIBL/AIBL_BIDS/sub-AIBL18/ses-M036/anat/sub-AIBL18_ses-M036_T1w.nii.gz''
**Converters**
- aibl-to-…
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First of all, thank you for open-sourcing this wonderful work! It’s exciting to explore its application to my data.
I encountered an issue while trying to use the pretrained weights on my data. Sin…
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I am using the getting started instruction on the (https://spinalcordtoolbox.com/) main page. I get to the register multimodal and use the code as shown below but when I get to the extract method I ge…
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Not sure if you'd prefer I make a pull request, or if you'd like to add this fix in yourself, but I noticed on line 364, the output path of an intermediate `antsApplyTransforms` command is:
`--outp…
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### Operating system and version
CentOS 7
### CPU architecture
x86_64 (PC, Intel Mac, other Intel/AMD)
### ANTs code version
2.5.0.post12-g9516f51
### ANTs installation type
Compiled from sour…
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In this issue, I investigate how to improve the lesion ground truth segmentation used for training our model.
We saw recently that on multiple images on the test, the predictions were actually bet…