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**Describe the bug**
`nix flake update` fails for me with the git config `safe.bareRepository=explicit`.
@mightyiam and I checked all the nix versions available in nixpkgs#nixVersions, the earli…
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### Is there an existing issue for this?
- [X] I have searched the existing issues
### Have you loaded the SQANTI3.env conda environment?
- [X] I have loaded the SQANTI3.env conda environment
### …
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Hi Woody,
Me again!(:
I recently scrutinized all the result files and came across the following 2 questions:
1. Is the PSIsigma_r10_ir3.txt file filtered from the PSIsigma.db file? If so, could y…
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Hello,
I wanted to check if a plugin for ensembl_vep tool (already in Galaxy) could be added to te tool: **nmd** or nonsense mediated decay which predicts whether a transcript escapes the nonsense me…
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Hi!
I have seen some works using NMDS x and y values of individuals to apply in SIBER (Fatty acids research).
I have tried this but some things appear to be incorrect.
(My data has two groups and …
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I used below code to generate NMDS plot, but I used here raw OTU count as input.
`prev.ordNMDS_data1 vsd
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Hi all,
Fantastic downstream tool!
I have generated some rMATS results following STAR alignment to GENCODE v42 genome. Following your guide I created a bed12 file from the comprehensive gene annot…
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Hi,
maybe not the place for this, but I wonder if anyone has encounter a similar issue.
I don't get convergence in my NMDS when using:
ordinate(ps1, "NMDS", "bray")
(My pseq looks like this):
…
sfeds updated
2 years ago
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