-
Dear Authors. Could you clarify please.
Is there a stronger threshold for the identification of eukaryotic viruses? Because those contigs, which according to the program belong to eukaryotic viruses …
-
Currently use a database from prophet, which is not an actively updated tool. https://github.com/jaumlrc/ProphET
Would be nice to use this database instead:
https://www.ncbi.nlm.nih.gov/pmc/arti…
-
http://phast.wishartlab.com/
-
I want to predict the phage-host using the SPacePHARER a tool developed by your team. I have metatranscriptome data and want to screen the bacteriophages. My question is what will be the .fas file (sp…
-
1. **Lab Name**: **Microbiology Virtual Lab II**
2. **List of Experiments and Repositories**:
Voges-Proskauer Test
https://github.com/virtual-labs/exp-voges-proskauer-test-au
v1.0.0
Trip…
-
I'm encountering an issue where certain identified regions from the Phaster analysis of my sequence (available at https://phaster.ca/submissions/NC_019418) are not appearing in the output, despite bei…
-
## *Repository Creation Request for Microbiology Virtual Lab II* _Phase-2_
1. #### Coordinating Institute: Amrita Vishwa Vidyapeetham
2. #### Approver’s Name: Dr. Shyam Diwakar
3. #### Prim…
-
Hi here,
When I run VIBRANT on a metagenomics, it came across an error. But the output file of this metagenomics is complete. I wonder if this error will influence my identification results.
Here is…
-
Hi, I was wondering why VIBRANT doesn't output the taxonomic identities of predicted phages (should they be not novel ones)? In case VIBRANT does this, where can I find this info in the output?
-
Hi,
Does the nextflow process execution timeline continue to update through the entire wtp run (i.e. should all finished processes be showing up in the timeline as they're completed)?
Along thos…