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```
Investigate ability of PRIDE to handle QCML as part
of ProteomeXchange submissions.
Which would be feasible integrations?
```
Original issue reported on code.google.com by `mathias....@gmail.co…
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On Wed, Aug 30, 2017 at 11:10 PM, Nuno Bandeira wrote:
Hi Raja,
It was great to touch base today - I'm attaching the [Nature Biotech paper](https://www.ncbi.nlm.nih.gov/pubmed/27504778) I menti…
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I want to konw our software MG-GF+ would generate files for complement submission in ProteomeXchange?
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For example, [Label-free Analysis of CD8+ T Cell Subset Proteomes Supports a Progressive Differentiation Model of Human-Virus-Specific T Cells](
https://www.ncbi.nlm.nih.gov/pubmed/28467900) (2017) p…
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```
Hi,
I am trying to convert X!Tandem results to PRIDE-XML results.
Here is the command I am using:
java -cp ".:/home/dfermin/proteomeXchange/pride-converter/lib" -Xms2g -Xmx24g
-jar
/home/dfer…
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Here a file with all the USIs corresponding to the reanalysis performed using quantms and DIANN workflow.
[PXD019909.1-USI.txt.zip](https://github.com/HUPO-PSI/usi/files/14040631/PXD019909.1-USI.t…
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Dear Professor
Sorry for disturbing you. I'd like to ask you a question.
The Universal Spectrum identifiers is a very professional tool. I recently used Universal Spectrum identifiers t…
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### Source Name
Mass Spectrometry Interactive Virtual Environment (MassIVE)
### Source URL
https://massive.ucsd.edu/ProteoSAFe/static/massive.jsp
API Documentation: https://ccms-ucsd.github.io/Mas…
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I'm not really sure whether this is a Unimod problem or an example file problem, but the multiple_spectra and scores_and_thresholds examples for 1.3 use UNIMOD accessions that are not present in eithe…
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We are using moFF on a larger dataset (27 label-free runs) and it takes a very long time (about 40h), even with setting for 16 threads and 150GB RAM.
Are there any parameter settings that can shor…