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compomics
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moFF
A modest Feature Finder (moFF) to extract MS1 intensities from Thermo raw file
Apache License 2.0
32
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sample files - raw data
#51
ArminGuntram
opened
2 years ago
0
sample name and fractionation
#50
KunathBJ
opened
3 years ago
0
Settings to accelerate execution time
#49
veitveit
opened
4 years ago
2
Backwards incompatible changes in pandas cause building the Dockerfile to fail
#48
YaPaHa
opened
4 years ago
2
Question about PTM file
#47
jblakele
opened
5 years ago
5
Raw to mgf conversion in moFF?
#46
CarlosHorro
closed
5 years ago
6
ValueError: cannot set a frame with no defined index and a scalar
#45
Hang0918
closed
4 years ago
6
sumIntensity or maxIntensity on the peptide summary file
#44
yafeng
closed
4 years ago
2
ValueError: Columns must be same length as key
#43
yafeng
closed
5 years ago
4
multiple raw/mzML files from one sample
#42
yafeng
closed
5 years ago
4
Failing to run moFF
#41
lgatto
closed
5 years ago
22
Fix shebang
#40
bgruening
closed
5 years ago
0
local variable 'xic_data' referenced before assignment
#39
Cheng111
closed
4 years ago
10
Fix MZML support
#38
antortjim
closed
5 years ago
0
match_filter as boolean
#37
bgruening
closed
5 years ago
0
initial python3 migration
#36
bgruening
closed
5 years ago
1
pep8 adjustments
#35
bgruening
closed
5 years ago
0
pep8 python files
#34
bgruening
closed
4 years ago
14
number of cores need to be adjustable
#33
bgruening
closed
5 years ago
2
moFF mzML
#32
wenbostar
closed
4 years ago
4
moFF Beta new version available
#31
Maux82
closed
5 years ago
2
moff installation problems
#30
assafkacen
closed
4 years ago
4
Cleaner CLI?
#29
caleb-easterly
closed
5 years ago
2
Post processing protein groups in peptide_summary_intensity file
#28
antortjim
closed
6 years ago
2
Detail on what pyMZML_xic_out does
#27
antortjim
closed
6 years ago
2
Standalone RAW Conversion in Linux
#26
antortjim
closed
6 years ago
2
missing "mono "
#25
caleb-easterly
closed
6 years ago
0
Update README.md with bioconda information
#24
caleb-easterly
closed
6 years ago
1
typo in moff.py
#23
caleb-easterly
closed
6 years ago
0
Some path changes for conda
#22
caleb-easterly
closed
6 years ago
3
RAW file and mzML differences
#21
caleb-easterly
closed
6 years ago
6
TypeError: compute_peptide_matrix() takes exactly 3 arguments
#20
caleb-easterly
closed
6 years ago
1
update scikit-learn version requirement from 0.17 to 0.18
#19
aphorton
closed
6 years ago
2
apex terminated: pandas.parser is deprecated
#18
lcscs12345
closed
6 years ago
3
Fixes bug in the way the txic path is created in linux
#17
jgriss
closed
6 years ago
1
moff_mbr breaks output file header
#16
jgriss
closed
7 years ago
7
Apex intensities reported as -1.0 on Linux (Ubuntu) using RAW files as input
#15
jgriss
closed
7 years ago
3
mzMl speedup
#14
mafreitas
closed
7 years ago
3
mzML Speedup
#13
mafreitas
closed
7 years ago
3
Added missing "pymzml" import statement to moff.py
#12
jgriss
closed
7 years ago
3
More than two rows having the same peptide sequence and modification for MBR result
#11
wenbostar
closed
7 years ago
1
low percent of shared peptides between files
#10
ningzhibin
closed
7 years ago
5
Could moFF output the retention time boundary of the integrated ion intensity envelop
#9
fcyu
closed
7 years ago
6
Questions about the rt_w and charge
#8
fcyu
closed
7 years ago
6
What is txic?
#7
fcyu
closed
7 years ago
2
"lwhm" or "rwhm" equal -1
#6
fcyu
closed
7 years ago
3
Quantitation of Peptides and Proteins
#5
Stortebecker
closed
7 years ago
3
Basic question about the quantitation algorithm
#4
Stortebecker
closed
7 years ago
2
txic
#3
wolski
closed
7 years ago
1
PeptideShaker moFF interaction via CLI
#2
bgruening
closed
2 months ago
30
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