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Hi all,
I ran into this error, which I don't understand what is related to (see log below - sorry for the huge log)!
This was my command:
```shell
${TRINITY_HOME}/Trinity --seqType fq \
--samp…
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Hi Brian, I’m submitting trinity on a slurm scheduler that has a max time limit. This limit is not sufficient for the size of my dataset. I know that trinity can pick up where it left off, but I am no…
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GO:0000448 cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
refers to the pathway performed by the Las1 compex
Definition
A four s…
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Dear team;
Thanks for providing those wonderful reference genome. It helps me a lot in my research. I met a problem that many of my reads could mapped to rrna region but was classified to not aligned…
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This issue illustrates how NCBI Datasets API can be used to generates JSON blobs necessary for rendering filament pages (https://github.com/galaxyproject/brc-analytics/issues/130).
## Linked Ticket…
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It may be a good idea to shift the metadata source from metrics to coldata in the long run. For anything other than human or mouse I have been removing the rrna part in the QC due to the extra file ne…
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## Short description of the problem
Even in single-contig circularized genomes, `anvi-run-hmms` does not reliably detect the 5S rRNA gene.
## anvi'o version
```
Anvi'o ......................…
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Dear KrakenUniq team,
I have a theoretical question - I was wondering if you could suggest something here. I am using KrakenUniq to classify bacterial reads from RNA-seq experiments. The database …
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Hi,
thank you for this great tool.
I am running spacemake for an openST data and encountering the following Error when running `spacemake run --cores 8`:
```Error
KeyError in line 286 of /ho…
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Hi, we are attempting to train and test rRNA data using SignalAlign. We would appreciate some insights into the program and any suggestions to move forward to.