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Hi there,
we use ICE with docker install. It is very easy and fast to use, thanks!
I am curious what exactly the error was if a sample failed analysis. The log shows:
`-- analyzing 40 filen…
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R problem SangeranalyseR workflow:
```
> my_aligned_contigs > 'SangerAlignment' S4 instance is created !!
> launchApp(my_aligned_contigs)
INFO [2020-12-10 11:16:47] Your input is 'SangerAlignmen…
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Not really a bug but using an older version of Java results in the below. Perhaps a more graceful Java version detection and/or warning/error message? Newer Java of course works.
```
#### STEP 4: …
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Hey guys,
I have a few questions from my run with the updated evSeq scripts:
1. Is there an uninstall script for the local version, in particular for the GUI? Could be worth adding info to docs.…
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Hi,
I'm getting Seg Faluts with gubbins when running with certain input files.
It's been working fine with other input files though.
I did an strace on my run, and here's the last few lines before i…
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**Submitting author:** @thomas-wright-bioinformatics (Thomas Wright)
**Repository:** https://github.com/thomas-wright-bioinformatics/pep_genie.git
**Branch with paper.md** (empty if default branch)…
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To Whom It May Concern,
A colleague and I were looking at the predictions for NM_000059.3(BRCA2):c.8488_8496dup. We put in [13:32945090-C-CAGTGGATGG](https://spliceailookup.broadinstitute.org/#var…
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Hello.
I was trying to assemble a genome with mira, and the process got killed for some reason (probably the server ran out of memory). When I tried to resume the assembly from a checkpoint by using…
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### Description of feature
Hello rnavar devs,
This is a feature request as well as an ask for assistance, if possible.
Essentially, I would like to add a small step in the pipeline, right bef…