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fhalab
/
evSeq
Computational tools for extremely low-cost, massively parallel amplicon-based sequencing of every variant in protein mutant libraries.
https://fhalab.github.io/evSeq/
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Need to update evSeq.yml dependencies
#39
jlaw9
closed
5 months ago
2
Data Processing error
#38
MaximilianoRosadio
opened
9 months ago
3
Question/Error fixing
#37
VNagesh-Bio
closed
1 year ago
7
Does evSeq support WSL?
#36
YTMiiikey
closed
2 years ago
3
Random questions
#35
rchurt
opened
2 years ago
16
Refactor Alignment and Data Processing
#34
brucejwittmann
opened
2 years ago
0
Support Mixed Readlengths
#33
brucejwittmann
opened
2 years ago
0
Reads with Length Longer than Refseq Thrown Away
#32
brucejwittmann
opened
2 years ago
0
Known Limitations
#31
brucejwittmann
opened
2 years ago
0
Lower int and float Sizes
#29
brucejwittmann
closed
2 years ago
1
Reimplement Pytests
#28
brucejwittmann
closed
2 years ago
1
Rows Sometimes Out of Order for Platemaps
#27
brucejwittmann
closed
2 years ago
0
Check GUI Still Works
#26
brucejwittmann
closed
2 years ago
1
Make Alignment Penalties Tunable
#25
brucejwittmann
closed
2 years ago
2
Merging of `tileSeq` branch back to `master`
#24
palmhjell
closed
3 years ago
0
Merge `update_docs` branch.
#23
palmhjell
closed
3 years ago
0
Updates to package architecture and data visualization functions
#22
kadinaj
closed
3 years ago
0
AaIndStart in RefSeq file cannot tolerate negative values
#21
NJPorter
closed
3 years ago
2
Trim adaptor sequences if found in refseq
#20
palmhjell
closed
3 years ago
2
Make setup.py file for easier install without needing to add to path.
#19
kadinaj
closed
2 years ago
2
Add functionality for visualizing sequence/function data.
#18
kadinaj
closed
2 years ago
2
Implement different metric than Alignment Frequency.
#17
kadinaj
closed
2 years ago
1
Unhandled exception encountered: 'cannot convert float NaN to integer'
#16
kadinaj
closed
4 years ago
2
Run fails if "NNN" not detected within both the forward and reverse reads
#15
kadinaj
closed
3 years ago
1
Update Matchmaking for Read Pairs
#14
brucejwittmann
closed
2 years ago
1
Change Q-Score Filtering Algorithm
#13
brucejwittmann
closed
2 years ago
1
GUI Not Activating, Cannot Find Modules
#12
brucejwittmann
closed
2 years ago
2
Kadina's sequencing run of high-quality primer dimer
#11
kadinaj
closed
4 years ago
0
Added functionality for generating an .html file of a sequencing summary heatmap for each plate
#10
kadinaj
closed
4 years ago
0
testing out branching
#9
kadinaj
closed
4 years ago
0
Alignment for mutagenesis at multiple sites
#8
andersknight
closed
2 years ago
1
implementing read quality plot
#7
palmhjell
closed
4 years ago
0
LCMS() needs some fine tuning
#6
palmhjell
closed
4 years ago
0
Graphical diagnostics
#5
palmhjell
closed
4 years ago
2
Unable to find frame of reference sequence without variable site
#4
palmhjell
closed
4 years ago
3
Parameters
#3
palmhjell
closed
4 years ago
1
Initial enhance
#2
palmhjell
closed
5 years ago
0
Some enhancements!
#1
palmhjell
closed
4 years ago
6