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Issue by @apeltzer, moved from SciLifeLab#688
> **Is your feature request related to a problem? Please describe.**
> If you don#t know the sex of an individual, one could run simple scripts to p…
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### In which category is your new term request?
- [X] new_definition
- [X] existing_definition
### Preferred term label
Gonadal sex determination
### Synonyms
Primary sex determination
Sex deter…
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### In which category is your new term request?
- [X] new_definition
- [X] existing_definition
### Preferred term label
Sex determination
### Synonyms
GO:0007530
### Textual definition
Any proc…
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### In which category is your new term request?
- [X] new_definition
- [ ] existing_definition
### Preferred term label
Sex Chromosome
### Synonyms
Allosome
### Synonym type
None
### Textual d…
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Hi,
Thanks for this very cool tool!
Could you please suggest a way to determine sex of every sample in vcfR?
One approach I know is heterozygosity rate on chrX. However, not sure how to calclaut…
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## Bug Report
### FilterIntervals
gatk FilterIntervals \
-L ${OUTPUT}/bins.interval_list \
--annotated-intervals ${OUTPUT}/bins_annotated.interval_list \
-imr OVERLAPPING_ONLY \
$INPUT…
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### In which category is your new term request?
- [ ] new_definition
- [X] existing_definition
### Preferred term label
ZW sex-determination
### Synonyms
_No response_
### Textual definition
A …
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@TCLamnidis introduced .janno variables in the minotaur workflow that could be universally useful. We could specify them in the next schema release.
Is this a good decision? How exactly would shoul…
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**Describe the bug**
As QC feature VarFish compare the sex of the ped file with the het. call ratio on chromosome X. Althoug males and females are cluster on the rigth side of the plot, females are s…
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Issue raised by Elsa, sex determination and anguillicola is different if done from microscopic or macroscopic inspection. Either use a new type id or create a table linking the sampling or series and …