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### Description
Sometime, like example, when working with very large amount of data you trying to process it by partitions, because you can't fit in memory
In that cases some parts of pipeline are…
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Hello!
I'm trying to pull the Docker container from Docker Hub using Singularity (my university HPC doesn't allow the use of Docker). I ran:
singularity build roadies.sif docker://ang037/roadies:l…
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Hi ZijieJin,
I tried the docker using first on my local but since the base image is not defined and my system is Mac I got incompatibility error! I tried on our hpc, since npc uses singularity I ha…
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Hello
I am trying to run this tool inside of a singularity container on an HPC.
The container was created in april 2024, and the github repo version therefor matches that date.
I am trying to run…
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`singularity exec ../EDTA.sif EDTA.pl --genome genome.fa --cds genome.cds.fa --curatedlib ../database/rice7.0.0.liban --exclude genome.exclude.bed --overwrite 1 --sensitive 1 --anno 1 --threads 5
…
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The following error is encountered when I tried to run
```
>>> fit_sim = fit.FitSimulation(init_sol, obs_df, init_cov, n_iter_max=n_iter_max, de_kernel=de_kernel, nongrav_info=nongrav_info)
```
fo…
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I was working with singularity documentation and this [commit](https://github.com/OpenDroneMap/docs/commit/8b6eec1998a8a94f198a4c9f83418e14fa24cd30) remove some useful code example.
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### Steps To Reproduce
After running configure, the outputs show
```
`singular: no suitable system package; standard, SPKG version 4.4.0 will be installed
```
### Expected Behavior
…
beew updated
16 hours ago
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I had successfully run it on singularity in past so i am not sure what is this issue if the new image has a bug ?
singularity run -C -B /nfs/turbo/umms-brcfmetab-project/tanusoni/test/output_slaw…
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Hi all,
I have been using the workflow described [here](https://rocker-project.org/use/singularity.html) to run RStudio on our HPC. Its been working brilliantly so far and makes my life so much eas…