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Hello, I had a question regarding how to interpret the results of the python suite2p deconvolution. It's not clear to me what the y-axis of the deconvolution result means.
Is the height of the spike…
dba91 updated
4 years ago
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Hello! I have a problem with the output from deconvolution (OASIS). I noticed in recent analysis output that my spike matrices were much denser in comparison to ones I analyzed about half a year ago. …
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I'm thinking of a series of gifs that explain convolution / deconvolution
1. Event "spikes" convolved with a simple ERP-like pattern => + add continuous noise
1. Estimate two ERPs and change ove…
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Is it possible to have an option where I can turn off the detrending, for example if I have known period of 'baseline' vs 'task epochs' and so that I am able to do custom baseline subtraction downstre…
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Hello
We are trying to convert some raw data to use with the SGC algorithm and are getting a crash during the oopsi algorithm.
Any advice is appreciated.
Thanks!
catubc
```
>> CALCIUM_FLUORE…
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I am running this code by taking frame rate of 1 Hz. But this algorithm identify spikes even though there is no variation in fluorescence intensity or there is presence of noise. How do i handle these…
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Do this code identify spikes for frame rate of 1 Hz?
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Please fill in the following for any issues
Your setup:
1. Operating System (Linux, MacOS, Windows): MacOS
2. Hardware type (x86, ARM..) and RAM: M1 16 gb
3. Python Version (e.g. 3.9): 3.10
…
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Hi,
I remember reading something in a readme a while ago that there is a more exact way to get peak times than using extractedPeaks, but for the life of me I cannot find it anymore. Is it deprecated?…
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**Describe the bug**
I was testing abess on the multitask learning problem below (deconvolution of a multichannel signal using a known point spread function / blur kernel by regressing the multichann…