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bahanonu
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ciatah
CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: https://git.io/ciatah_docs. Formerly known as calciumImagingAnalysis (ciapkg).
https://git.io/ciatah_docs
MIT License
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Update README, docs, license, and example data
#139
bahanonu
closed
3 months ago
0
HPC implementation for large videos
#138
NataliaFavila
opened
4 months ago
1
Error during cross registration
#137
hsw28
opened
4 months ago
2
File IO, movie playing, and GUI updates; add open field annotation
#136
bahanonu
closed
6 months ago
1
DeepLabCut import function
#135
bahanonu
closed
6 months ago
0
Update README.md
#132
bahanonu
closed
1 year ago
0
Update README.md
#131
bahanonu
closed
1 year ago
0
Batch converting isxd to h5 specify inscopix path
#130
rbutleriii
opened
1 year ago
1
PCA traces have negative values
#129
NataliaFavila
opened
1 year ago
3
"Please input a file path."
#128
hsw28
opened
1 year ago
2
Poor cell segmentation
#127
RandallJEllis
opened
1 year ago
2
How to use viewCellExtractionOnMovie?
#126
RandallJEllis
closed
1 year ago
9
Unrecognized field name "GroupHierarchy" + other errors when running modelExtractSignalsFromMovie with EXTRACT algorithm
#125
RandallJEllis
closed
1 year ago
5
Downsample raw movie with avi format?
#124
hmfeng
opened
1 year ago
2
issue loading AVI -> variable does not support dot indexing (solved)
#123
dprotter
opened
1 year ago
2
Error loading frame for modelPreprocessMovie
#122
dprotter
opened
1 year ago
3
Merging components
#121
NataliaFavila
opened
1 year ago
0
modelPreprocessMovie NormCorre bug
#120
Antorithms
opened
1 year ago
9
Update BigTIFF support
#119
bahanonu
closed
1 year ago
0
Info on modelPreprocessMovie
#118
Antorithms
opened
1 year ago
2
Error with ciatah update modelpreprocessMovie
#117
Antorithms
closed
1 year ago
4
extracted peaks
#116
hsw28
opened
1 year ago
12
Update example data download links.
#115
bahanonu
closed
1 year ago
1
Error in running viewMovieRegistrationTest Pipeline. How can I solve this?
#114
RosaliaM21
opened
1 year ago
6
Ciatah skipping files
#110
NataliaFavila
closed
1 year ago
1
Code and GUI improvements, NoRMCorre and additional file formats support, etc.
#108
bahanonu
closed
1 year ago
1
parameters in PCA-ICA analysis
#107
NataliaFavila
opened
1 year ago
6
Update README and misc CIAtah methods
#106
bahanonu
closed
2 years ago
2
modelSaveMatchObjBtwnTrials
#105
jonasoa
closed
2 years ago
2
non-existent field 'GroupHierarchy'
#104
Yancy81
opened
2 years ago
5
Update ciapkg.signal_extraction.runPcaIca
#103
bahanonu
closed
2 years ago
0
Misc. improvements, GUI speed-ups, and new options
#100
bahanonu
closed
2 years ago
1
Fix start
#99
RedaChal
closed
2 years ago
0
signalSorter gone
#98
Antorithms
closed
2 years ago
10
Update viewMovieRegistrationTest.m
#97
bahanonu
closed
2 years ago
0
Update modelDownsampleRawMovies
#96
bahanonu
closed
2 years ago
1
Error: Undefined function 'getFileList'
#95
LaSal2090
closed
2 years ago
2
Improved initialization, movie processing selection, and misc.
#94
bahanonu
closed
2 years ago
1
Can`t install
#93
nobody15469
closed
1 year ago
3
Turboreg issue in CIAtah 4.0.0
#92
omidm7
closed
2 years ago
9
CIAtah 4.0 and NWB compatibility updates, remove unused File Exchange, etc.
#90
bahanonu
closed
2 years ago
1
CIAtah version 4.0
#89
bahanonu
closed
2 years ago
1
GUI very ugly
#88
Silver-Fang
closed
2 years ago
2
Memory problem
#87
harshk95
opened
2 years ago
8
Move file_exchange to _external_programs, function updates, and README URLs for all major external programs.
#86
bahanonu
closed
2 years ago
1
Issue with computeMatchObjBtwnTrials
#85
omidm7
opened
2 years ago
6
Infinite loop
#84
milesOIST
closed
2 years ago
10
Updated to MIT license, move functions into ciapkg package, gramm graphics, detrend support, speed improvements, and more
#82
bahanonu
closed
2 years ago
1
Add Miji URL backup and movie controls to CIAtah main GUI
#81
bahanonu
closed
2 years ago
1
Consider moving to ImageJ-MATLAB instead of Miji
#80
imagejan
opened
2 years ago
2
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