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bahanonu
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ciatah
CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: https://git.io/ciatah_docs. Formerly known as calciumImagingAnalysis (ciapkg).
https://git.io/ciatah_docs
MIT License
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GUI updates, fast thresholding, and misc updates.
#78
bahanonu
closed
3 years ago
1
Updated ciatah GUI and loading movie updates
#77
bahanonu
closed
3 years ago
1
cmdLinePipeline updates
#76
bahanonu
closed
3 years ago
1
Improved pre-processing UI, Bio-Formats support, easier ImageJ/Miji loading, and more.
#74
bahanonu
closed
3 years ago
1
Update README.md
#73
bahanonu
closed
3 years ago
1
Update README.md
#72
bahanonu
closed
3 years ago
1
SNR data export
#71
laopenti
opened
3 years ago
2
.h5 file not found after preprocessing (motion correction) step
#70
rl72
opened
3 years ago
16
README and docs update
#69
bahanonu
closed
3 years ago
1
Using extract (2021)
#68
omidm7
opened
3 years ago
8
Move @calciumImagingAnalysis functions to @ciatah, version check updates, etc.
#67
bahanonu
closed
3 years ago
1
New load/save cell-extraction outputs, EXTRACT support, and misc. updates
#66
bahanonu
closed
3 years ago
1
Incomplete data upload during CNMF-E cell extraction
#65
miguelvmc
opened
3 years ago
7
Adding ciapkg API sub-package, improved directory management, etc.
#64
bahanonu
closed
3 years ago
1
Dot indexing is not supported for variables of this type
#63
laopenti
opened
3 years ago
5
Using the cell extraction output when extracting cells with cnmf-e
#62
luciedescamps
opened
3 years ago
2
playMovie and misc. updates
#61
bahanonu
closed
3 years ago
1
Update README.md
#60
bahanonu
closed
3 years ago
0
README update, image/signal loading streamline, etc.
#59
bahanonu
closed
3 years ago
1
Error when trying to view miniscope avi
#58
hsw28
opened
3 years ago
60
Updates to README, etc.
#57
bahanonu
closed
3 years ago
1
Updates for ISXD dropped frames, ROI signal extraction, and misc. features
#56
bahanonu
closed
3 years ago
1
Improved command-line processing and playMovie/signalSorter GUIs along with new/updated functions
#55
bahanonu
closed
3 years ago
1
Update signalSorter
#54
bahanonu
closed
3 years ago
0
Updated NWB support
#53
bahanonu
closed
3 years ago
1
playMovie read from disk, two-photon example data, ciapkg updates
#52
bahanonu
closed
3 years ago
1
Save settings to processed HDF5, adding docs, and misc updates
#51
bahanonu
closed
3 years ago
1
No movie found matching manualCut
#50
Hanbing1999
opened
4 years ago
2
Improved MATLAB toolbox checking, dependency updates, and more.
#49
bahanonu
closed
4 years ago
1
Drift in delta F/F
#48
chanduborkar
opened
4 years ago
1
Command line pipeline demo and misc updates.
#47
bahanonu
closed
4 years ago
0
Usability updates for GUI, loading, and pre-processing
#46
bahanonu
closed
4 years ago
0
Reorganizing calciumImagingAnalysis directory structure
#45
bahanonu
closed
4 years ago
1
calciumImagingAnalysis class refactoring and NWB updates
#44
bahanonu
closed
4 years ago
0
Create `ciapkg` package, pre-processing updates
#43
bahanonu
closed
4 years ago
1
Large feature update: new main GUI, NWB support, and more.
#42
bahanonu
closed
4 years ago
1
Question about registration output
#41
kevinyamauchi
closed
4 years ago
4
README and signalSorter updates
#40
bahanonu
closed
4 years ago
0
calciumImagingAnalysis GUI update
#39
bahanonu
closed
4 years ago
1
Preprocessing settings new features and cross-session update
#38
bahanonu
closed
4 years ago
1
signalSorter UI updates and several calciumImagingAnalysis improvements
#37
bahanonu
closed
4 years ago
1
Update README.md
#36
bahanonu
closed
4 years ago
0
signalSorter new feature + normalizeMovie, loadMovieList, Miji loading, etc. improvements
#35
bahanonu
closed
4 years ago
1
calciumImagingAnalysis class update
#34
bahanonu
closed
4 years ago
0
New error in modelGetSignalsImages
#33
omidm7
opened
4 years ago
18
Cell extraction HDF5 dataset update
#32
bahanonu
closed
4 years ago
0
HDF5 dataset name handling and misc. updates
#31
bahanonu
closed
4 years ago
0
Java heap space check and signalSorter/playMovie/viewMovieRegistrationTest updates
#30
bahanonu
closed
4 years ago
1
dfofMovie and viewMovieRegistrationTest updates
#29
bahanonu
closed
4 years ago
0
signalSorter improvements, general git downloader, and misc updates
#28
bahanonu
closed
4 years ago
1
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