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Hi,
I have scSLAM-seq from two samples (control, treated). I have aligned the fastq file using STAR Solo and now trying to generate the CIT file from the Bam files. I will next use the CIT in GRAN…
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Hi Alex,
I am trying to analyze allele-specific single cell RNAseq data collected through 10x chromium v2 and I was wondering if Wasp allele specific calling would work in the context of STAR solo.…
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Good morning , I'm new in the field of bioinformatics and I want to verify some points with you.
what are the 2 approaches adopted by cellranger and star solo ? is it true that CellRanger uses a ref…
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Thank you for providing this fascinating tool.
I do have a question regarding its application. Is the STAR Solo tool only applicable for human and mouse cells, as it is the case with Cell Ranger? I …
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Hi, I have a question, is it possible to run CiteSeq data with STAR solo?
Thanks for helping
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### Is there an existing issue for this?
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### New Tool Description
Solo learn is an website where we can access many courses with good user friendly , simpl…
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Hi, I am trying figure out what settings to use in order for star solo to most closely match the outputs for cell ranger 5xx for 10x 5' paired end 150bp reads. I am currently trying the following, but…
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I'm trying to use STARsolo to analyze novel scRNAseq data using techniques such as scFAST-seq or snRandom-seq. The principle is basically the same, using random primers to capture single cells. Its pa…
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Using single-end SmartSeq data with STAR Solo results in an almost immediate crash.
I have tried with data originally generated as single-end and also one end of a paired end data set that otherwis…
tzuni updated
4 years ago
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