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Accession: SO:0001668
Synonym: (add) promoter proximal region
Def: DNA segment that ranges from about -250 to -40 relative to +1 of RNA transcription start site, where sequence specific DNA-binding tr…
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Following terms are request for supporting annotation of Beta Cell Genomics studies.
DNA methylation profiling by ChIP-chip assay
epigenetic modification assay
transcription profiling by MPSS assa…
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### [Transcription factors](https://www.youtube.com/watch?v=Sd3imcsvXxI)
1. Transcription factor (proteins) control the expression of genes by regulating the process of gene transcription.
![gene-…
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GO:0000120 RNA polymerase I transcription factor complex
A transcription factor complex that acts at a regulatory region of a gene transcribed by RNA polymerase I.
I have
+ RNA polymerase I …
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**Project:**
Transcription factor binding sites are important regulatory elements found upstream or downstream of a gene's transcription start site. These DNA-binding sites are non-exact, often repres…
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1. [Integrating ChIP-seq with other functional genomics data](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5888983/pdf/ely002.pdf)
2. [2014-nature review-Identifying and mitigating bias in next-gener…
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Hello developers,
Very cool tool and great paper.
I was wondering if this tool could be adapted for non-human samples (e.x. cattle)? Or was it specifically developed or trained with hg19 in mi…
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SO have been aligned to BFO and most of SO terms are GDC. SO: sequence is primary structure of DNA molecule and inheres\_in a DNA molecule.
Details please check:
http://www.sequenceontology.org/reso…
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**Reported by kchris on 2010-06-12 00:00 UTC**
Hi,
There are some promoter motifs, e.g. the "A_box" that is part_of "RNApol_III_promoter_type_2" that are is_a children of "TF_binding_site", which is …
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Please provide as much information as you can:
* **Suggested term label:**
This is a first stab at this term, open to suggestions:
transcriptional interfering lncRNA activity
* **Definiti…