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ArnaoutLab
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diversity
Partitioned frequency- and similarity-sensitive diversity in Python
MIT License
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update type-annotation syntax
#103
chhotii-alex
opened
6 days ago
0
drop 3.8 support officially
#102
chhotii-alex
opened
6 days ago
0
fix up CI grid to use current Python versions
#101
chhotii-alex
opened
6 days ago
0
minor refactoring to clear all mypy errors
#100
chhotii-alex
opened
6 days ago
0
mypy gives errors
#99
chhotii-alex
opened
6 days ago
0
94 move ray dependence into an extra
#98
chhotii-alex
closed
2 weeks ago
0
make unit tests in similarity_test more illustrative of typical usage
#97
chhotii-alex
opened
3 weeks ago
0
allow abundance matrix to be sparse
#96
chhotii-alex
opened
4 weeks ago
0
surface p and Zp vectors in API
#95
chhotii-alex
opened
1 month ago
0
move ray dependence into an extra
#94
chhotii-alex
closed
2 weeks ago
0
Feature request: implement Vendi scores
#93
IosiaLectus
opened
1 month ago
1
Feature request: Similarity sensitive KL divergence
#92
IosiaLectus
opened
1 month ago
4
compatibility with numpy version 2.x
#91
chhotii-alex
closed
3 weeks ago
1
pytorch-ify greylock
#90
chhotii-alex
opened
3 months ago
0
Attempts to allocate full memmap to memory
#89
IosiaLectus
closed
5 months ago
4
ray dependency forbids upgrading Python to 3.12 or above
#88
chhotii-alex
closed
2 weeks ago
5
warnings issued when beta greater than one
#87
chhotii-alex
opened
9 months ago
2
Ray pattern
#86
chhotii-alex
closed
9 months ago
0
Optimize computation for symmetric similarity
#85
chhotii-alex
closed
9 months ago
0
weighted_similarity_chunk maybe could be optimized
#84
chhotii-alex
closed
9 months ago
6
allow configuring so that jobs are submitted to a ray cluster
#83
chhotii-alex
opened
10 months ago
1
closes #80
#82
chhotii-alex
closed
10 months ago
0
Mock ray
#81
chhotii-alex
closed
10 months ago
0
improve guidance on what technique to use to make similarity matrix
#80
chhotii-alex
closed
10 months ago
0
similarity matrix may be a numpy array
#79
chhotii-alex
closed
10 months ago
0
Features df
#78
chhotii-alex
closed
10 months ago
0
Specify df
#77
chhotii-alex
closed
10 months ago
0
added link to preprint to the README
#76
nhongphuc
closed
10 months ago
0
add link to preprint to README
#75
chhotii-alex
closed
10 months ago
0
Sparse similarity
#74
chhotii-alex
closed
10 months ago
0
optional measures parameter on to_dataframe()
#73
chhotii-alex
closed
10 months ago
0
Fix regen sim #71
#72
chhotii-alex
closed
10 months ago
0
SimilarityFromFunction regenerates similarity matrix multiple times
#71
chhotii-alex
closed
10 months ago
0
expanded Advanced Usage section
#70
nhongphuc
closed
10 months ago
0
setproctitle can cause problem loading ray
#69
chhotii-alex
closed
2 weeks ago
2
fix URLs and details
#68
chhotii-alex
closed
11 months ago
0
put tests folder inside src, deleted init file in tests
#67
nhongphuc
closed
11 months ago
0
renamed package to greylock, moved tests folder to inside src, other …
#66
nhongphuc
closed
11 months ago
0
put tests folder inside src folder, renamed package to greylock
#65
nhongphuc
closed
11 months ago
0
changed name of package to metacommunity_diversity
#64
nhongphuc
closed
11 months ago
4
scipy missing from dependencies
#63
chhotii-alex
closed
10 months ago
2
updates to pyproject.toml
#62
chhotii-alex
opened
11 months ago
0
ray memory spillage when dealing with large dataset
#61
chhotii-alex
closed
9 months ago
1
update ray version in dependency?
#60
chhotii-alex
opened
11 months ago
1
included rho-hat, beta-hat
#59
nhongphuc
closed
11 months ago
4
similarity function functionality is insufficiently general
#58
chhotii-alex
closed
10 months ago
1
intermittent failure of pytest due to coverage requirement
#57
chhotii-alex
closed
10 months ago
3
code sample under "...from a function" in README is confusing
#56
chhotii-alex
closed
10 months ago
1
should have a conda recipe
#55
chhotii-alex
opened
1 year ago
0
sparse similarity matrix?
#54
chhotii-alex
closed
10 months ago
1
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