BIC-MNI minc-tools issues

BIC-MNI / minc-tools

Basic minc-tools from former minc repository

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issues

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Add GEMS slice order to mincheader

#71 jpcoutu closed 6 years ago
4
dcm2mnc can't read DICOM fields with OB value representation

#70 ajwood opened 6 years ago
4
mnc2nii treats minc files touched by different minc tools differently

#69 gdevenyi closed 4 years ago
6
nii2mnc (and Display) improperly handles some NIFTI files

#68 gdevenyi opened 7 years ago
1
dcm2mnc and JPEG compression

#67 andrewjanke closed 4 years ago
3
dcm2mnc with multi-echo from Bruker 7T flattens all echos into single scan

#66 gdevenyi opened 7 years ago
1
Feature Idea: mincheader query specific item

#65 gdevenyi closed 7 years ago
2
splitoff dcm2mnc into a separate project

#64 vfonov opened 7 years ago
3
develop, libjpeg code depends on 1.8 series functions

#63 gdevenyi closed 4 years ago
1
develop, openjpeg code relies on removed functions in openjpeg 2.0

#62 gdevenyi opened 7 years ago
2
dcm2mnc: update manpage to document %P for using protocol name in mnc file naming

#61 gdevenyi opened 7 years ago
12
incorrect percent difference calculation in mincmath?

#60 mcvaneede opened 7 years ago
2
mincreshape doesn't handle minc files with double/float storage type correctly when image_range is not specified

#59 vfonov opened 7 years ago
0
An an option to dcmsort to link the files rather than copying or moving

#58 gdevenyi closed 7 years ago
0
mnc2dcm tools on develop not installed

#57 gdevenyi opened 7 years ago
3
mincreshape changes dimension spacing from regular to irregular, when space has coordinates associated with it

#56 vfonov opened 7 years ago
5
xfminvert doesn't preserve dimorder

#55 bcdarwin opened 7 years ago
3
conversion/CMakeLists.txt doesn't include extra conversion scripts

#54 gdevenyi opened 7 years ago
0
Fix octave call so that octave doesn't try to run .mat file

#53 gdevenyi closed 7 years ago
0
dcm2mnc HEAD "forgets" about naming scheme

#52 gdevenyi opened 7 years ago
1
mnc2nii intensity ranges

#51 lblewis opened 8 years ago
5
Mincreshape normalize and fill

#50 gdevenyi opened 8 years ago
0
mincreample allows conflicting options

#49 gdevenyi opened 8 years ago
0
mincreshape can't do non-integer slice steps

#48 gdevenyi closed 8 years ago
2
minccomplete not installed with minc-toolkit?

#47 gdevenyi closed 4 years ago
2
mincmorph removes identity direction cosines from the header

#46 zijdenbos opened 8 years ago
1
minclookup loses quotes around lut_string when saving history

#45 gdevenyi closed 7 years ago
4
dcm2mnc HEAD (ce5e4ddd978c5a40e23b5097a30e2a30f88cd271) segfaults on Philips DICOMs

#44 gdevenyi opened 8 years ago
3
"mincresample -transform" diffusion gradients

#43 ajwood opened 8 years ago
3
Feature Idea: Allow mnc2nii to use transform from a nifti file

#42 gdevenyi opened 8 years ago
11
rawtominc wrongness with nonstandard dimname

#41 bcdarwin opened 8 years ago
1
Convert to octave-based MAT reader

#40 gdevenyi closed 8 years ago
6
ana2mnc_xfm_reduce.pl reports perl scope errors?

#39 gdevenyi opened 8 years ago
2
Convert to octave-based MAT reader

#38 gdevenyi closed 8 years ago
2
mincstats with ``-pctT 0`` isn't parsed properly

#37 gdevenyi closed 7 years ago
2
dcm2mnc devel HEAD cannot properly convert Bruker 7T timeseries data

#36 gdevenyi closed 8 years ago
16
Reordering dimensions like a reference volume

#35 ajwood closed 8 years ago
1
minc_modify_header can't delete top-level variables

#34 gdevenyi opened 8 years ago
4
build failed on ubuntu 16.04

#33 poquirion closed 8 years ago
2
nii2mnc miscalculates minc start values

#32 jesperfr closed 4 years ago
27
mincaverage ignores -no_check_dimensions

#31 gdevenyi closed 8 years ago
4
xfm2def discretisation

#30 ajwood opened 8 years ago
3
minccmp range values

#29 andrewjanke opened 8 years ago
2
Build Fails Ubuntu 12.04

#28 cfhammill closed 4 years ago
3
Build fails without bison & flex

#27 smr99 opened 8 years ago
1
Work around missing MAXPATHLEN (e.g. on debian/hurd).

#26 smr99 closed 8 years ago
0
<program> -help goes into infinite loop

#25 vfonov closed 9 years ago
1
Argument parsing

#24 andrewjanke opened 9 years ago
6
Problem with spm realign

#23 Angel-Fernandez closed 8 years ago
1
Compile fails on Mac 10.9 64bit

#22 reckbo closed 4 years ago
1

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