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BIMIB-DISCo
/
TRONCO
Repository of the TRanslational ONCOlogy library, which includes various algorithms (such as CAPRESE and CAPRI) and the Pipeline for Cancer Inference (PICNIC).
https://bimib-disco.github.io/TRONCO
GNU General Public License v3.0
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PiCnIc/TRONCO for different samples of the same tumor
#134
Tato14
closed
11 months ago
5
Development
#133
luca-dex
closed
1 year ago
0
A weird oncoplot in Tronco
#132
MaryGoAround
closed
2 years ago
1
Development
#131
luca-dex
closed
2 years ago
0
update to 2.25.1
#130
luca-dex
closed
3 years ago
0
Misuse of `events.selection`?
#129
marcoxa
closed
3 years ago
6
Reduce # of cores used during examples and tests
#128
luca-dex
closed
3 years ago
0
Adding vignette to pkgdown site
#127
luca-dex
closed
4 years ago
0
test pkgdown
#126
luca-dex
closed
4 years ago
0
Development
#125
luca-dex
closed
4 years ago
0
Using CAPRI’s functioning by my own data
#124
beginner984
closed
4 years ago
1
Is this possible to get such a plot by TRONCO
#123
beginner984
closed
4 years ago
7
Prepare for R 4.0.0
#122
luca-dex
closed
4 years ago
1
How can I place hits for an individual gene next to each other
#121
beginner984
closed
4 years ago
1
Showing an oncoplot in a side by side view
#120
beginner984
closed
4 years ago
2
How to arrange the sample in oncoplrint
#119
beginner984
closed
4 years ago
8
Using my own maf object as input for TRONCO
#118
beginner984
closed
4 years ago
1
BioC 3.10
#117
luca-dex
closed
4 years ago
1
R version to 3.6
#116
luca-dex
closed
5 years ago
0
Development
#115
luca-dex
closed
5 years ago
1
Development
#114
luca-dex
closed
5 years ago
0
Wikipathways
#113
luca-dex
closed
5 years ago
1
added real pathways from wikipathways to vignette
#112
AlexanderPico
closed
5 years ago
3
Target panel data for CAPRI/CAPRESSE
#111
Tato14
closed
6 years ago
6
Hyperlink DOIs against preferred resolver
#110
katrinleinweber
closed
6 years ago
1
gRapHD dependency
#109
rdiaz02
closed
6 years ago
1
hits legend in oncoprint not showing up.
#108
JOl-lN
closed
6 years ago
1
Error when trying to create a circos plot
#107
Tato14
closed
6 years ago
6
return probabilities of genotypes under model
#106
rdiaz02
closed
6 years ago
3
Bug fix hypotheses.add
#105
danro9685
closed
7 years ago
1
cyTRONdev to development
#104
danro9685
closed
7 years ago
0
cyTRONdev to development
#103
danro9685
closed
7 years ago
0
cyTRONdev
#102
danro9685
closed
7 years ago
0
Bug tronco.plot when expanding hypotheses
#101
egalimberti
closed
6 years ago
5
Check tronco.plot for multiple regularizators
#100
egalimberti
closed
6 years ago
4
Development 2.9.0
#99
danro9685
closed
7 years ago
0
Release 2.8.0
#98
danro9685
closed
7 years ago
0
Development
#97
danro9685
closed
7 years ago
0
Release
#96
danro9685
closed
7 years ago
0
Development
#95
danro9685
closed
7 years ago
0
Minor fixes for Release
#94
danro9685
closed
7 years ago
0
Development for Bioconductor release 3.5
#93
danro9685
closed
7 years ago
0
Implementation of bootstrap estimation in C
#92
danro9685
closed
6 years ago
2
more fixes for Bioconductor release 3.5
#91
danro9685
closed
7 years ago
0
Development Bioconductor 3.5
#90
danro9685
closed
7 years ago
1
Biocoductor3.5 minor fixes
#89
danro9685
closed
7 years ago
1
Development
#88
danro9685
closed
7 years ago
1
some minor fixes for Bioconductor release 3.5
#87
danro9685
closed
7 years ago
1
Attributes of the tronco model
#86
lucreziaPatruno
closed
7 years ago
1
export.graphML and output graph format
#85
CostantiniMatteo
closed
7 years ago
1
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