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BioJulia
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FASTX.jl
Parse and process FASTA and FASTQ formatted files of biological sequences.
https://biojulia.dev
MIT License
61
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20
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Make writers parametric and buffered
#26
jakobnissen
closed
3 years ago
1
ERROR: EOFError: read end of file
#25
godkin1211
closed
4 years ago
4
Fix zero-length copy
#24
jakobnissen
closed
4 years ago
1
Different slicing methods for FASTX.FASTA.sequences produces inconsistent behavior
#23
cjprybol
closed
4 years ago
2
Delete unused files
#22
TransGirlCodes
closed
4 years ago
0
Run on Julia LTS
#21
TransGirlCodes
closed
4 years ago
1
Inbounds FASTQ parser
#20
jakobnissen
closed
4 years ago
1
LoadError: UndefVarError: LongSequence not defined during precompilation step
#19
fethalen
closed
4 years ago
1
Remove use of internal `encode_copy!` [DO NOT MERGE]
#18
jakobnissen
closed
4 years ago
0
Add docs on reading gzipped files
#17
kescobo
closed
4 years ago
2
CompatHelper: bump compat for "Automa" to "0.8"
#16
github-actions[bot]
closed
4 years ago
1
add FASTA.identifier(record) example in docs
#15
dehann
closed
4 years ago
1
Bug in `Reader` with stream
#14
Zymergen-phaverty
closed
4 years ago
4
Unexpected behaviour when reading FASTA files with read!(reader, record)
#13
harryscholes
closed
4 years ago
6
Is FASTX.jl really only compatible with julia 1.1?
#12
blaiseli
closed
4 years ago
1
Implement generic methods for commonly used functions and export them
#11
harryscholes
closed
4 years ago
2
Implement hashing and equality for Records
#10
harryscholes
closed
5 years ago
6
Handle case where input is a TranscodingStream.
#9
blaiseli
closed
5 years ago
1
Reading fastq from TranscodingStream
#8
blaiseli
closed
5 years ago
1
Release version 1.1
#7
TransGirlCodes
closed
5 years ago
3
Add copyto! methods for copying record data to BioSequences
#6
TransGirlCodes
closed
5 years ago
1
copyto!
#5
TransGirlCodes
closed
5 years ago
0
Release version 1.0
#4
TransGirlCodes
closed
5 years ago
4
BioGenerics compat line prevents Pkg from adding
#3
mmattocks
closed
5 years ago
5
Test issue
#2
TransGirlCodes
closed
5 years ago
84
Use TranscodingStreams for FASTA
#1
TransGirlCodes
closed
5 years ago
0
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