BioLockJ-Dev-Team sheepdog_testing_suite issues

BioLockJ-Dev-Team / sheepdog_testing_suite

Test suite for BioLockJ development team.

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issues

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make combined docker specification option

#336 IvoryC opened 10 months ago
0
docker config options are too verbose

#335 IvoryC opened 10 months ago
1
spell out solution pipeline.inputTypes=other

#334 IvoryC opened 1 year ago
0
pipeline.deleteTempFiles

#333 IvoryC opened 2 years ago
1
no more #!/usr/bin/python in GenModDemo.config

#332 IvoryC closed 2 years ago
1
create progress module interface

#331 IvoryC opened 2 years ago
0
add finess to readme

#330 IvoryC opened 2 years ago
0
fix typo in release process instructions

#329 IvoryC opened 2 years ago
0
Add --workdir in worker docker commands

#328 IvoryC opened 2 years ago
0
R error messages need sep lines

#327 IvoryC opened 2 years ago
0
fix typo: necissary

#326 IvoryC opened 2 years ago
1
Add test for comma-sep metadata file.

#325 IvoryC closed 3 years ago
0
shorts: add a mechanism to include very short files in the config file

#324 IvoryC opened 3 years ago
0
make build instructions for external module projects

#323 IvoryC opened 3 years ago
0
metaphlan2 parser

#322 ssun6 opened 3 years ago
0
figure out the deal with required properties

#321 IvoryC opened 3 years ago
0
Add to docs section about the property types.

#320 IvoryC opened 3 years ago
0
relax the assumption that the jar file is named BioLockJ.jar

#319 IvoryC opened 3 years ago
0
inherited properties need to inherit description etc

#318 IvoryC closed 3 years ago
1
Make tests for data flow properties

#317 IvoryC opened 3 years ago
0
test for MaskOutput module

#316 IvoryC opened 3 years ago
0
Create a data flow description

#315 IvoryC opened 3 years ago
0
stagnate module docker images

#314 IvoryC opened 3 years ago
0
messages around install

#313 IvoryC closed 3 years ago
1
Verbose

#312 IvoryC closed 3 years ago
0
For each

#311 IvoryC closed 3 years ago
0
implement the project.name property, the pipeline does not need to be named based on the config file name.

#310 IvoryC opened 3 years ago
0
implement free-hand project description property: project.description

#309 IvoryC closed 3 years ago
1
myFirstPipeline should be helloWorld

#308 IvoryC opened 3 years ago
0
No need for `--blj` in initial docker test command

#307 IvoryC closed 3 years ago
1
biolockj.version property should show up sooner

#306 IvoryC opened 3 years ago
0
RdpHierParser needs to mention the rdp.hierCounts property

#305 IvoryC closed 3 years ago
2
Rdp parser

#304 IvoryC closed 3 years ago
0
Add in troubleshooting guide: sublime text coloring for .config files

#303 IvoryC closed 3 years ago
2
Expect that all worker scripts have the added echo line.

#302 IvoryC closed 3 years ago
0
direct module worker script fails even when it succeeds

#301 IvoryC closed 3 years ago
5
validation props need check dep

#300 IvoryC closed 3 years ago
2
Stop

#299 IvoryC closed 3 years ago
0
validation.stopPipeline should show 'N' as default

#298 IvoryC closed 3 years ago
2
remove downstream modules during reset

#297 IvoryC opened 3 years ago
0
Touch this in check dependencies

#296 IvoryC closed 3 years ago
1
Add to docs

#295 IvoryC opened 3 years ago
0
Add the STOP module

#294 IvoryC closed 3 years ago
1
fix mystery failures in Rdp Parser

#293 IvoryC closed 3 years ago
6
Doc vols

#292 IvoryC closed 3 years ago
0
message about docker downloads during check dependencies

#291 IvoryC opened 3 years ago
0
need message when docker fails to find container for manager

#290 IvoryC opened 3 years ago
0
docker volumes face problems starting with arbitrary folder vol_10

#289 IvoryC closed 3 years ago
1
Document module input and output types in userguide

#288 IvoryC opened 3 years ago
0
docker volume consolidation

#287 IvoryC closed 3 years ago
1