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BradnerLab
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pipeline
bradner lab computation pipeline scripts
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Installation failure of bamliquidator on centos7
#82
Yuxuan0060
opened
1 year ago
0
Restored bokeh plotting functionality with Docker build
#81
jdimatteo
opened
2 years ago
0
Installation failure in MacOS
#80
xiaoyonf
opened
3 years ago
0
bamliquidator_batch ValueError: cannot set WRITEABLE flag to True of this array
#79
raphaelbetschart
closed
3 years ago
1
Adding docs from wiki to docs folder
#78
vsoch
closed
4 years ago
0
Quickly fix travis errors which seems to have been broken for years
#77
jdimatteo
closed
4 years ago
1
Adding instructions for build and usage of containers
#76
vsoch
closed
4 years ago
7
conversion from python2 to python3
#75
madetunj
closed
4 years ago
0
Add Python3 support
#74
jdimatteo
closed
4 years ago
0
travis tests failing
#73
jdimatteo
opened
4 years ago
1
created a very simple test script for basic sanity after installation
#72
GodloveD
closed
4 years ago
2
real examples with data and output
#71
GodloveD
closed
4 years ago
6
Correct binsize calculation
#70
Drmirdeep
opened
4 years ago
6
Wrong binsize calculation accumulates offset errors with increasing bin numbers
#69
Drmirdeep
opened
4 years ago
0
Pypi packages are dropping python2 support
#68
jvrakor
opened
4 years ago
0
supported to run ROSE2 in python3 environment
#67
gauravj49
opened
5 years ago
2
support bionic for ppa
#66
jdimatteo
closed
5 years ago
0
networkScatter.R not found
#65
ssmadha
closed
5 years ago
2
MAC installation problem
#64
biogeeky
opened
5 years ago
0
Docker
#63
jdimatteo
closed
4 years ago
5
Operation Timed out on ROSE2
#62
GryderArt
opened
6 years ago
13
bamliquidator_regions error
#61
itsvenu
opened
6 years ago
1
Questions about installation and output
#60
lachlansimpson
closed
6 years ago
1
Installation issue: -lbam is error, but hdf5/serial isn't a thing at all?
#59
lachlansimpson
closed
6 years ago
8
Error in bamToGFF.py
#58
gunjangala
closed
7 years ago
6
bamliquidator: Installation issues
#57
itsvenu
closed
6 years ago
6
procedure to add a reference genome
#56
mpallocc
closed
6 years ago
4
Centos 6.8 build
#55
jdimatteo
closed
7 years ago
0
Motif liquidator matrix
#54
jdimatteo
closed
8 years ago
0
installation on MAC
#53
nbahlis
closed
6 years ago
9
enable Jenkins motif liquidator tests on master branch when merged with master
#52
jdimatteo
opened
8 years ago
1
bamliquidator_batch now compatible with latest bokeh version
#51
jdimatteo
closed
8 years ago
3
global name 'maketrans' is not defined
#50
fburdet
closed
9 years ago
3
Unhandled exception: pthread_attr_setstacksize: Invalid argument
#49
davidhoover
closed
8 years ago
7
Reverted order of int casting to prevent divide by zero errors
#48
dpolaski
closed
9 years ago
0
Merged Fed's crc utils version with the current version
#47
dpolaski
closed
9 years ago
0
bamliquidator crashes after failed absurdly large memory allocation
#46
jdimatteo
closed
9 years ago
3
consider using git submodules and allowing local builds of bamliquidator?
#45
semenko
closed
9 years ago
5
version 1.2 minor bug fixes and enhancements
#44
jdimatteo
closed
9 years ago
0
bamliquidator_batch (calling bamliquidator_regions) fails on valid .bed file
#43
semenko
closed
9 years ago
4
provide option for a different normalization method
#42
jdimatteo
opened
9 years ago
2
tod /crusader backup filesystem full
#41
jdimatteo
closed
9 years ago
7
bamliquidator_batch -m option for multiple files should add columns
#40
jdimatteo
closed
9 years ago
0
Update Install Instructions when bamliquidator 1.2 released
#39
jdimatteo
closed
9 years ago
1
clean up bamliquidator build and dput warnings
#38
jdimatteo
opened
9 years ago
0
consider adding an option to control the number of threads used by bamliquidator_batch
#37
jdimatteo
closed
9 years ago
0
testing notifications
#36
bar2222
closed
10 years ago
0
enhance reporting of parsing errors
#35
jdimatteo
opened
10 years ago
0
Exclude bad regions
#34
jdimatteo
closed
10 years ago
2
bamliquidator rounding error
#33
jdimatteo
closed
9 years ago
3
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