CDCgov cfa-viral-lineage-model issues

CDCgov / cfa-viral-lineage-model

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Unstandardized time

#66 afmagee42 closed 1 day ago
0
Split up tests

#65 afmagee42 opened 4 weeks ago
0
Bring DC into CFA style

#64 afmagee42 opened 1 month ago
0
Geographically aggregated forecasts

#63 afmagee42 closed 4 weeks ago
2
Alternative inference machinery

#62 afmagee42 opened 1 month ago
0
MCMC seed not being respected?

#61 afmagee42 opened 1 month ago
0
Amend architecture flowchart

#60 swo opened 1 month ago
0
Package scope as pertains to data processing

#59 afmagee42 opened 1 month ago
0
Time standardization and slope priors

#58 afmagee42 closed 1 month ago
3
Fix #2

#57 afmagee42 closed 1 month ago
0
Something between count scoring and proportion scoring

#56 afmagee42 opened 2 months ago
1
Priors on natural scale; fitting on time-standardized scale

#55 thanasibakis closed 1 day ago
1
Architecture flowchart

#54 swo closed 1 month ago
4
Parquets, argparse, & normal-sized PNGs

#53 thanasibakis closed 2 months ago
0
Make a flow chart

#52 swo closed 1 month ago
1
Some ideas for a generalized evaluation OOP setup

#51 thanasibakis opened 2 months ago
1
Count-based evaluation

#50 afmagee42 closed 1 day ago
2
Syncing lineages between model and eval data

#49 afmagee42 opened 3 months ago
0
Clean up imports

#48 afmagee42 closed 3 months ago
5
Priors redux and time standardization

#47 afmagee42 opened 3 months ago
0
Omicron analysis

#46 thanasibakis closed 3 months ago
0
Enable fitting to Omicron

#45 afmagee42 closed 3 months ago
0
use python 3.12 or higher

#44 afmagee42 closed 3 months ago
0
e2e test or similar

#43 afmagee42 opened 3 months ago
0
Should paths be overwritten automatically?

#42 thanasibakis opened 3 months ago
0
Prior selection

#41 afmagee42 closed 3 months ago
0
Can we shrink forecast plot image sizes?

#40 thanasibakis closed 2 months ago
2
Automatic path creation

#39 thanasibakis closed 3 months ago
0
Match simulation study to new package structure

#38 afmagee42 opened 3 months ago
0
Add model ladder to README

#37 thanasibakis closed 3 months ago
0
Bug fix for data `save_file` config

#36 thanasibakis closed 3 months ago
0
Remove use of map_elements

#35 thanasibakis closed 3 months ago
0
Patch eval when convergence diagnostics are saved

#34 thanasibakis closed 3 months ago
0
Data synchronization

#33 afmagee42 closed 3 months ago
1
Simple history visualization

#32 afmagee42 closed 3 months ago
0
Make config documentation user-accessible

#31 afmagee42 opened 3 months ago
0
Track MCMC convergence

#30 afmagee42 closed 3 months ago
2
Filter which lineages are modeled

#29 thanasibakis closed 3 months ago
2
YAML-run pipeline, part 2 (data preprocessing)

#28 thanasibakis closed 3 months ago
4
Make a simple viz script for all data

#27 afmagee42 closed 3 months ago
0
Configurable number of day's data and forecasting date

#26 afmagee42 closed 3 months ago
0
YAML-run pipeline, part 1 (modeling/eval)

#25 thanasibakis closed 3 months ago
1
Assertions to check dataframe joins

#24 thanasibakis opened 3 months ago
1
Evaluations for counts

#23 afmagee42 opened 3 months ago
0
Add Makefile to #11

#22 swo closed 4 months ago
0
Makefile updates

#21 swo closed 4 months ago
0
CUDA warning

#20 swo closed 3 months ago
3
Unit testing

#19 thanasibakis opened 4 months ago
0
Miscellaneous codebase improvements

#18 thanasibakis closed 2 months ago
0
mkdocs

#17 swo closed 3 months ago
0