issues
search
CDCgov
/
ww-inference-model
An in-development R package and a Bayesian hierarchical model jointly fitting multiple "local" wastewater data streams and "global" case count data to produce nowcasts and forecasts of both observations
https://cdcgov.github.io/ww-inference-model/
Apache License 2.0
16
stars
2
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
Update _pkgdown.yml
#167
kaitejohnson
closed
4 weeks ago
2
Improve package provided GI using `primarycensoreddist`
#166
kaitejohnson
opened
4 weeks ago
1
Solution to L_Omega initialization
#165
kaitejohnson
closed
1 month ago
1
163 expand R version
#164
kaitejohnson
closed
1 month ago
2
Expand compatible R versions
#163
kaitejohnson
closed
4 weeks ago
1
Only allow users to get "predicted_counts" and "global_rt" if not fitting to wastewater data
#162
kaitejohnson
opened
1 month ago
0
Add error message for plotting functions
#161
kaitejohnson
opened
1 month ago
0
Add contributors
#160
kaitejohnson
closed
1 month ago
1
Kj tweaks to 123
#159
kaitejohnson
closed
1 month ago
0
Restructure hierarchical estimation based on reference subpopulation
#158
kaitejohnson
closed
2 weeks ago
14
Making a simulation study script for spatial ww model
#157
cbernalz
opened
1 month ago
1
update author list
#156
kaitejohnson
closed
1 month ago
0
Caution box render issue on website
#155
athowes
opened
1 month ago
1
Add functionality to handle no wastewater data
#154
kaitejohnson
closed
22 hours ago
0
Adding new class and method for get_draws
#153
gvegayon
closed
1 month ago
1
Spatial branch for merge of main
#152
cbernalz
closed
1 month ago
0
Merging Main into Spatial Main
#151
cbernalz
closed
1 month ago
0
Merging Main into Spatial-Main
#150
cbernalz
closed
1 month ago
0
Refactor hierarchical site-level estimation to estimate `n_subpops-1` deviations from the "reference" subpopulation
#149
kaitejohnson
closed
22 hours ago
6
Add hex logo to repo
#148
kaitejohnson
closed
1 month ago
12
Reconsider output structure of function `get_draws_df()`
#147
kaitejohnson
closed
1 month ago
8
Set seeds in test_get_stan_data
#146
dylanhmorris
closed
1 month ago
0
Discuss future of MCMC snapshot test in `test_ww_model.R`
#145
dylanhmorris
opened
1 month ago
1
Update NEWS.md
#144
gvegayon
closed
1 month ago
0
2024-09-03 update : adding spatial vignette.
#143
cbernalz
closed
4 weeks ago
2
Fix `test_get_stan_data` so random failure doesn't occur
#142
kaitejohnson
closed
1 month ago
2
Vignette tweaks
#141
kaitejohnson
closed
1 month ago
0
Add action to automatically run pre-commit if fails
#140
kaitejohnson
closed
6 days ago
1
Add GH actions to automatically commit autofixes from `pre-commit`
#139
kaitejohnson
opened
1 month ago
6
Vignette showing how to modify the model
#138
kaitejohnson
opened
1 month ago
0
Vignette showing how to evaluate the added value of data
#137
kaitejohnson
opened
1 month ago
0
Come up with a way to handle if `sum(site_pop) > total_pop`
#136
kaitejohnson
opened
1 month ago
2
Tweaks to model definition
#135
kaitejohnson
closed
1 month ago
0
Tweaks to model definition
#134
kaitejohnson
closed
1 month ago
0
Cite Kissler paper for triangular hinge function for viral kinetics
#133
kaitejohnson
opened
1 month ago
0
Clarify language on "local" vs "global" variables
#132
kaitejohnson
opened
1 month ago
0
Clarify vignette outlier handling
#131
kaitejohnson
opened
1 month ago
0
Small tweaks to vignette
#130
kaitejohnson
closed
1 month ago
0
Simple installation vignette
#129
kaitejohnson
opened
1 month ago
2
Various bug fixes
#128
kaitejohnson
closed
1 month ago
1
Fix check for required wastewater columns
#127
kaitejohnson
closed
1 month ago
3
Fix NEWS.md
#126
kaitejohnson
closed
1 month ago
1
update vignette to reflect default NULL seed in mcmcoptions
#125
kaitejohnson
closed
1 month ago
0
Write additional tests for postprocessing
#124
kaitejohnson
opened
1 month ago
0
Vignette for 3 sims and 3 fits
#123
cbernalz
closed
4 weeks ago
0
Modify package to expect log scale concentration values and LODs
#122
kaitejohnson
closed
1 month ago
0
Expect log(conc) values instead of natural scale concentration values
#121
kaitejohnson
closed
1 month ago
0
update hierarchical estimate of sigma_site in `model_definition`
#120
kaitejohnson
closed
1 month ago
0
Fix documentation to reflect fix in hierarchical stdev in observation model
#119
kaitejohnson
closed
1 month ago
0
Structure of the NEWS.md file
#118
gvegayon
closed
1 month ago
2
Previous
Next