issues
search
CDCgov
/
ww-inference-model
An in-development R package and a Bayesian hierarchical model jointly fitting multiple "local" wastewater data streams and "global" case count data to produce nowcasts and forecasts of both observations
https://cdcgov.github.io/ww-inference-model/
Apache License 2.0
16
stars
2
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
Windows error with initial compiling
#217
arranhamlet
opened
5 hours ago
3
Forecast hospitalizations using only wastewater data
#216
scarpino
opened
1 day ago
4
Merge `main` into `spatial-main`
#215
kaitejohnson
opened
1 day ago
0
Suppress stan warnings and print warning within `wwinference()` if convergence diagnostics fail?
#214
kaitejohnson
opened
1 day ago
0
Windows workaround in `compile_model`
#213
kaitejohnson
opened
1 day ago
1
Setup pkgdown so it hosts release and dev sites
#212
gvegayon
closed
1 day ago
4
Constrain `dur_shedding` to be greater than `t_peak`
#211
dylanhmorris
opened
1 week ago
0
Positive constrain `mode_sigma_ww_site`
#210
dylanhmorris
closed
1 week ago
2
Deployment failure
#209
kaitejohnson
opened
2 weeks ago
2
Fix error messaging when data extends beyond forecast date
#208
kaitejohnson
closed
2 weeks ago
1
Update README.md
#207
kaitejohnson
closed
2 weeks ago
1
Test rendering the vignette on mac and Windows in CI
#206
dylanhmorris
opened
2 weeks ago
2
Update NEWS.md
#205
kaitejohnson
closed
2 weeks ago
1
Add `R CMD check` on macOS to CI
#204
dylanhmorris
opened
2 weeks ago
1
Edit description with release tag
#203
kaitejohnson
closed
2 weeks ago
1
Fix error messaging if accidentally pass data beyond forecast date
#202
kaitejohnson
closed
2 weeks ago
0
Hot fix warn if data exceeds forecast date
#201
kaitejohnson
closed
2 weeks ago
2
Modify `plot` methods
#200
kaitejohnson
opened
2 weeks ago
1
hot-fix initialization misspecifies parameter name for `error_rt_subpop`
#199
kaitejohnson
closed
2 weeks ago
4
Alternative install of cmdstan using cmdstanr::*
#198
gvegayon
closed
2 weeks ago
6
Rename `validate_both_datasets()` to `validate_data_jointly()`
#197
kaitejohnson
opened
2 weeks ago
0
Make reference subpopulation configurable by the user
#196
kaitejohnson
opened
2 weeks ago
0
`import` or qualify namespace for `desc` and `formalArgs`
#195
dylanhmorris
opened
2 weeks ago
0
Improve error messaging for the various no wastewater cases
#194
kaitejohnson
opened
2 weeks ago
0
Remove the snapshot test, fix a few other bugs
#193
dylanhmorris
closed
2 weeks ago
0
Set up release and dev pkgdown sites
#192
kaitejohnson
closed
1 day ago
5
Hot fix validate pmf
#191
kaitejohnson
closed
2 weeks ago
1
add multiple os to matrix strategy
#190
kaitejohnson
closed
2 weeks ago
11
Run `R CMD check` on Windows and macOS as well as Ubuntu in CI
#189
dylanhmorris
closed
2 weeks ago
7
move `cmdstanr` to suggests
#188
gvegayon
closed
2 weeks ago
5
Unable to find include files when running through the worked example
#187
arranhamlet
opened
2 weeks ago
20
Meta v1.2 Scope out needs to submit package to cran
#186
kaitejohnson
opened
2 weeks ago
1
Add subpopulation count data to model/ `generate_simulated_data()` function
#185
kaitejohnson
opened
3 weeks ago
0
Add outputs to `generate_simulated_data()
#184
kaitejohnson
opened
3 weeks ago
0
Only run post-page-artifact job on PRs
#183
dylanhmorris
closed
3 weeks ago
1
Build link comment in PRs: update comment instead of re-creating on rebuilds
#182
dylanhmorris
closed
3 weeks ago
2
Adding the post-page-artifact job
#181
gvegayon
closed
3 weeks ago
4
Preview github-pages on PRs
#180
gvegayon
closed
3 weeks ago
0
Fix formatting so functions link
#179
kaitejohnson
closed
2 weeks ago
5
171 add links
#178
kaitejohnson
closed
3 weeks ago
0
2024-09-19 update : adding spatial scenes.
#177
cbernalz
opened
3 weeks ago
0
Fix low ESS warning messaging in CI
#176
kaitejohnson
opened
3 weeks ago
0
174 cmdstanr sample args
#175
kaitejohnson
closed
2 weeks ago
12
Most if not all of the arguments to `cmdstanr` `sample()` should be optionally configurable from the `wwinference()` interface
#174
dylanhmorris
closed
2 weeks ago
1
Exploring scenarios for when IID inference model fails when compared to others
#173
cbernalz
opened
4 weeks ago
0
Add plotting functions to spatial-main
#172
kaitejohnson
opened
4 weeks ago
0
Add links to package functions in vignettes
#171
kaitejohnson
opened
4 weeks ago
6
Tweaks to main vignette
#170
kaitejohnson
closed
4 weeks ago
1
fix rendering to katex, add mathcal Rt to vignette
#169
kaitejohnson
closed
4 weeks ago
1
Change how offsets are handled
#168
dylanhmorris
closed
4 weeks ago
0
Next