COMBINE-lab simpleaf issues

COMBINE-lab / simpleaf

A rust framework to make using alevin-fry even simpler

BSD 3-Clause "New" or "Revised" License

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issues

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Update test_simpleaf.yml

#152 rob-p closed 1 day ago
0
Dev

#151 rob-p closed 1 day ago
0
Update test_simpleaf.yml

#150 rob-p closed 1 day ago
0
Update test_simpleaf.yml

#149 rob-p closed 1 day ago
0
Update test_simpleaf.yml

#148 rob-p closed 1 day ago
0
Update test_simpleaf.yml

#147 rob-p closed 1 day ago
0
Update test_simpleaf.yml

#146 rob-p closed 1 day ago
0
Update test_simpleaf.yml

#145 rob-p closed 1 day ago
0
Update test_simpleaf.yml

#144 rob-p closed 1 day ago
0
Update simpleaf_conda_env.yml

#143 rob-p closed 1 day ago
0
Update simpleaf_conda_env.yml

#142 rob-p closed 1 day ago
0
Update test_simpleaf.yml

#141 rob-p closed 1 day ago
0
chore(main): release 0.17.0

#140 github-actions[bot] closed 1 day ago
1
Dev

#139 rob-p closed 1 day ago
0
Merge main back into dev

#138 rob-p closed 5 days ago
0
Error: invalid base: 0067

#137 holmrenser opened 4 weeks ago
6
Retaining sample origin information

#136 pakiessling closed 1 month ago
2
[question]: maximum available parallelism and number of threads

#135 tamuanand opened 3 months ago
1
Error: alevin-fry generate-permit-list failed with exit status ExitStatus(unix_wait_status(25856))

#134 lichtobergo closed 3 months ago
19
Indexing error: piscem index failed to build succesfully ExitStatus(unix_wait_status(132))

#133 lichtobergo closed 3 months ago
5
0 cells returned

#132 mousepixels closed 4 months ago
4
10x genomics FFPE chemistry

#131 wangjiawen2013 opened 5 months ago
0
chore(main): release 0.16.2

#130 github-actions[bot] closed 5 months ago
1
Dev

#129 rob-p closed 5 months ago
0
permit list download failure

#128 rpolicastro closed 5 months ago
8
Merge main back into dev

#127 rob-p closed 5 months ago
0
indexing error: there is no k-mer that belongs to a list of size > 128 and <= 256

#126 rpolicastro closed 5 months ago
9
chore(main): release 0.16.1

#125 github-actions[bot] closed 5 months ago
1
fix: update 10xv3 permit list location

#124 rob-p closed 5 months ago
0
fix: add piscem to conda env

#123 rob-p closed 5 months ago
0
chore(main): release 0.16.0

#122 github-actions[bot] closed 5 months ago
1
Dev

#121 rob-p closed 5 months ago
0
merge main back into dev

#120 rob-p closed 5 months ago
0
consider making piscem a dependency in the simpleaf conda env

#118 rpolicastro closed 4 months ago
5
chore(main): release 0.15.1

#117 github-actions[bot] closed 8 months ago
1
Dev

#116 rob-p closed 8 months ago
0
Cell-by-isoform matrix

#115 sameer-aryal opened 8 months ago
2
Update .readthedocs.yaml

#114 rob-p closed 8 months ago
0
Merge main into dev

#113 rob-p closed 8 months ago
0
chore(main): release 0.15.0

#112 github-actions[bot] closed 8 months ago
1
Refactor workflow

#111 rob-p closed 8 months ago
0
Rework workflow implementation

#110 rob-p closed 8 months ago
2
Merge main back into dev

#109 rob-p closed 8 months ago
0
fix: write workflow log when external command fails

#108 DongzeHE closed 8 months ago
2
Title: Issues with awk/gawk Command Errors in Step 5 of Data Processing Workflow in 10x-feature-barcode-antibody.jsonnet

#107 wanisajad closed 8 months ago
13
Too many obs

#106 partrita closed 9 months ago
3
BD data

#105 cathalgking opened 9 months ago
4
Processing SplitSeq / ParseBio data with simpleaf

#104 wmacnair opened 9 months ago
3
How to obtain simpleaf previous versions

#102 sdr08 closed 10 months ago
1
add tutorial website's link to doc

#101 DongzeHE closed 10 months ago
0