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CRI-iAtlas
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iatlas-app
R Shiny app for CRI iAtlas, an interactive web portal for exploring immuno-oncology data. (iAtlas portal 2022 and beyond)
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Expand collection of gene signatures
#252
Gibbsdavidl
opened
3 weeks ago
0
New sc datsets, using API for data retrieval
#251
heimannch
closed
3 weeks ago
0
Check pseudobulk data for Shiao
#250
heimannch
closed
1 month ago
0
Patient demographics not available at cohort selection
#249
heimannch
closed
1 month ago
2
error when starting from docker env
#248
Gibbsdavidl
closed
1 month ago
4
add cohort selection for single cell RNA seq datasets
#247
heimannch
opened
2 months ago
0
TIL Maps not showing plots
#246
heimannch
closed
1 month ago
1
germline GWAS plot only showinng one option of immune feature
#245
heimannch
closed
3 weeks ago
1
Add single cell modules
#244
heimannch
closed
6 months ago
0
Release 2.2
#243
heimannch
closed
9 months ago
0
Majority of Genes Missing from CNV output
#242
heimannch
closed
9 months ago
1
Metadata on 'iatlas-ici-features.tsv'
#241
jbannon
closed
1 month ago
1
fix #239
#240
heimannch
closed
10 months ago
0
Predictors of response to ICI not showing results on Immune Features module
#239
heimannch
closed
10 months ago
0
Igv update
#238
heimannch
closed
1 year ago
1
gwas germline module broken in igvShiny version 1.5.1
#237
wfulp
closed
1 year ago
2
Bug fixes
#236
heimannch
closed
1 year ago
0
Bug fixes
#235
heimannch
closed
1 year ago
0
broken links to references in ICI Dataset overview
#234
heimannch
closed
1 year ago
0
Download of table with results of Immune Subtype Classifier
#233
heimannch
closed
1 year ago
0
methods links in Data Description are broken
#232
heimannch
closed
1 year ago
0
metadata fields "Sample_Treated" and "Sample_Treatment"
#231
gsiegwald
closed
1 year ago
2
normalization of gene expressiont table
#230
gsiegwald
closed
1 year ago
1
fix ML issues #228
#229
heimannch
closed
2 years ago
0
Machine Learning crashes server
#228
Gibbsdavidl
closed
1 year ago
0
"Select all" needed for sample groups filtering
#227
vthorsson
opened
2 years ago
0
example file in Immune Classifier with old path
#226
heimannch
closed
1 year ago
0
Merge 2.1
#225
heimannch
closed
2 years ago
0
ICI Datasets overview lists fewer datasets ICI than cohort selection
#224
vthorsson
closed
2 years ago
2
Update r2
#223
andrewelamb
closed
2 years ago
0
Update text
#222
heimannch
closed
2 years ago
0
nloptr not able to be installed in shinyaps.io
#221
andrewelamb
closed
2 years ago
0
Update R,BioC, packages
#220
andrewelamb
closed
2 years ago
3
Update r2
#219
andrewelamb
closed
2 years ago
4
Add UI for Nanostring datasets
#218
heimannch
closed
2 years ago
0
moved R to 4.2, bioc to 3.15
#217
andrewelamb
closed
2 years ago
0
Tumor Microenvironment plot cutting off bars
#216
heimannch
closed
1 month ago
0
Immune Subtype not an option in "Select or Search for Grouping Variable" in ICI Cohort Selection
#215
heimannch
closed
1 month ago
0
Inconsistencies in Responder/Progression/Clinical_Benefit annotations
#214
jaeddy
closed
1 year ago
8
updated api library
#213
andrewelamb
closed
2 years ago
0
updated package names
#212
andrewelamb
closed
2 years ago
0
Create nanostring data query
#211
andrewelamb
closed
2 years ago
2
Revert "rename iatlas packages"
#210
andrewelamb
closed
2 years ago
0
rename iatlas packages
#209
andrewelamb
closed
2 years ago
2
update workflows so that the testing branch does not exist.
#208
andrewelamb
closed
2 years ago
0
Update workflows
#207
andrewelamb
closed
2 years ago
0
Testing
#206
andrewelamb
closed
2 years ago
0
Change color scheme to match new color palette
#205
heimannch
closed
2 years ago
0
Testing
#204
andrewelamb
closed
2 years ago
0
Issue 193 deployment 2
#203
andrewelamb
closed
2 years ago
1
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